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Searching for up to 100 curated homologs for WP_027723114.1 NCBI__GCF_000425265.1:WP_027723114.1 (154 a.a.)

Found high-coverage hits (≥70%) to 10 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Q729F0 NAD(P)H dehydrogenase (quinone) (subunit 1/3) (EC 1.6.5.2) from Desulfovibrio vulgaris (see paper)
    79% identity, 92% coverage of query (249 bits)

5odcD / A0A2D0TC98 Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus at 2.3 a resolution (see paper)
    51% identity, 88% coverage of query (153 bits)

VHCD_METVO / Q00405 F420-non-reducing hydrogenase vhc iron-sulfur subunit D; EC 1.12.99.- from Methanococcus voltae (see paper)
    52% identity, 86% coverage of query (151 bits)

MVHD_METTM / P60238 F420-non-reducing hydrogenase iron-sulfur subunit D; Methyl viologen-reducing hydrogenase subunit delta; MVH subunit D; EC 1.12.99.- from Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg) (Methanobacterium thermoautotrophicum) (see 2 papers)
    50% identity, 83% coverage of query (149 bits)

VHCD_ARCPA / P84624 F420-non-reducing hydrogenase iron-sulfur subunit D; EC 1.12.99.- from Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) (see paper)
    50% identity, 82% coverage of query (146 bits)

hdrA2 / Q8TM02 HdrA2 (EC 1.8.7.3; EC 1.8.98.4) from Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) (see 2 papers)
HDRA2_METAC / Q8TM02 Ferredoxin/F(420)H(2)-dependent CoB-CoM heterodisulfide reductase subunit A; Coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase subunit A; Ferredoxin:CoB-CoM heterodisulfide reductase subunit A; EC 1.8.7.3; EC 1.8.98.4 from Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) (see 2 papers)
    46% identity, 81% coverage of query (145 bits)

7bkbF / Q2FKZ0 Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) (see paper)
    52% identity, 82% coverage of query (144 bits)

mvhD / Q2RJ82 MvhD from Moorella thermoacetica (strain ATCC 39073 / JCM 9320) (see paper)
    40% identity, 90% coverage of query (119 bits)

Q6LWL3 coenzyme F420 hydrogenase (EC 1.12.98.1) from Methanococcus maripaludis (see paper)
    36% identity, 81% coverage of query (105 bits)

Build an alignment

Build an alignment for WP_027723114.1 and 9 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

qmoB / Q7X166 QmoB from Desulfovibrio desulfuricans (see 4 papers)
    27% identity, 81% coverage of query (60.5 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory