Searching for up to 100 curated homologs for WP_029001265.1 NCBI__GCF_000430725.1:WP_029001265.1 (448 a.a.)

Found high-coverage hits (≥70%) to 26 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

BPHYT_RS04765 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans PsJN
    73% identity, 100% coverage of query (651 bits)

H281DRAFT_00642 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila 376MFSha3.1
    75% identity, 97% coverage of query (637 bits)

PS417_07265 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae WCS417
    43% identity, 90% coverage of query (303 bits)

ABAQ_ACIBA / P0DPR4 Quinolone resistance transporter from Acinetobacter baumannii (see 2 papers)
    37% identity, 94% coverage of query (270 bits)

BWI76_RS23715 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis M5al
    38% identity, 96% coverage of query (255 bits)

PS417_11005 L-arabinose transporter from Pseudomonas simiae WCS417
    34% identity, 94% coverage of query (236 bits)

YfaV / b2246 putative transporter YfaV from Escherichia coli K-12 substr. MG1655 (see 4 papers)
TC 2.A.1.14.35 / P76470 Inner membrane transport protein RhmT from Escherichia coli (strain K12) (see 4 papers)
    33% identity, 93% coverage of query (231 bits)

NICT_PSEPK / Q88FY6 Putative metabolite transport protein NicT; Nicotinate degradation protein T from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
    33% identity, 95% coverage of query (225 bits)

TC 2.A.1.14.8 / Q9RPP3 Phthalate porter from Burkholderia cepacia (Pseudomonas cepacia) (see paper)
    33% identity, 96% coverage of query (218 bits)

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Build an alignment for WP_029001265.1 and 9 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

CH_124128 MFS transporter from Magnaporthe grisea 70-15 (see paper)
    27% identity, 90% coverage of query (147 bits)

CH_124322 MFS transporter from Magnaporthe grisea 70-15 (see paper)
    28% identity, 72% coverage of query (129 bits)

CH_124204 putative monocarboxylate exporter from Magnaporthe grisea 70-15 (see paper)
    24% identity, 98% coverage of query (103 bits)

6e9nA / J7QAK3 E. Coli d-galactonate:proton symporter in the inward open form (see paper)
    28% identity, 83% coverage of query (100 bits)

YidT / b3691 D-galactonate:H⁺ symporter from Escherichia coli K-12 substr. MG1655 (see 9 papers)
dgoT / P0AA76 D-galactonate:H⁺ symporter from Escherichia coli (strain K12) (see 11 papers)
DGOT_ECOLI / P0AA76 D-galactonate transporter; D-galactonate/H(+) symporter from Escherichia coli (strain K12) (see 4 papers)
TC 2.A.1.14.7 / P0AA76 Galactonate transporter from Escherichia coli (see 4 papers)
    27% identity, 83% coverage of query (97.8 bits)

6e9oA E. Coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form
    28% identity, 83% coverage of query (95.9 bits)

YC7A_SCHPO / O94491 Uncharacterized transporter C417.10 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    24% identity, 96% coverage of query (90.1 bits)

SAUU_CUPNH / Q0K843 Probable sulfoacetate transporter SauU from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (Ralstonia eutropha) (see paper)
    22% identity, 94% coverage of query (84.7 bits)

AO356_28540 D-mannose transporter from Pseudomonas fluorescens FW300-N2C3
    26% identity, 90% coverage of query (81.6 bits)

GarP / b3127 galactarate/D-glucarate transporter GarP from Escherichia coli K-12 substr. MG1655 (see 6 papers)
garP / P0AA80 galactarate/D-glucarate transporter GarP from Escherichia coli (strain K12) (see 5 papers)
GARP_ECOLI / P0AA80 Probable galactarate/D-glucarate transporter GarP from Escherichia coli (strain K12) (see 2 papers)
    26% identity, 92% coverage of query (79.3 bits)

TC 2.A.1.14.14 / Q8FDB7 Probable D-galactarate (glucarate?):H+ symporter, GarP or YhaU from Escherichia coli O6 (see paper)
    26% identity, 91% coverage of query (79.0 bits)

PS417_04205 D-galacturonate transporter (MFS superfamily) from Pseudomonas simiae WCS417
    24% identity, 94% coverage of query (77.8 bits)

8u3gA Structure of naag-bound sialin (see paper)
    22% identity, 80% coverage of query (55.8 bits)

8u3hA Structure of fmoc-leu-oh bound sialin
    22% identity, 80% coverage of query (54.3 bits)

S17A5_HUMAN / Q9NRA2 Sialin; H(+)/nitrate cotransporter; H(+)/sialic acid cotransporter; AST; Membrane glycoprotein HP59; Solute carrier family 17 member 5; Vesicular excitatory amino acid transporter; VEAT from Homo sapiens (Human) (see 10 papers)
TC 2.A.1.14.10 / Q9NRA2 Lysosomal sialate transporter (Salla disease and infantile sialate storage disease protein (Morin et al., 2004)). Also transports glucuronic acid and aspartate. Structure-function studies have identify crucial residues and substrate-induced conformational changes (Courville et al., 2010). Also called SLC17A5. The substrate binding pocket has been identified based on modeling studies (see 8 papers)
    22% identity, 73% coverage of query (51.6 bits)

S17A5_RAT / Q5Q0U0 Sialin; H(+)/nitrate cotransporter; H(+)/sialic acid cotransporter; AST; Solute carrier family 17 (Anion/sugar transporter), member 5; Vesicular excitatory amino acid transporter; VEAT from Rattus norvegicus (Rat) (see 2 papers)
    23% identity, 78% coverage of query (51.6 bits)

S17A5_MOUSE / Q8BN82 Sialin; H(+)/nitrate cotransporter; H(+)/sialic acid cotransporter; AST; Solute carrier family 17 member 5; Vesicular excitatory amino acid transporter; VEAT from Mus musculus (Mouse) (see 3 papers)
    22% identity, 78% coverage of query (50.8 bits)

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