Sites on a Tree

 

Searching for up to 100 curated homologs for WP_035700910.1 NCBI__GCF_000691145.1:WP_035700910.1 (240 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

LUTC_BACCR / Q81GA3 Lactate utilization protein C from Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) (see paper)
    49% identity, 99% coverage of query (238 bits)

lutC / O32259 component of an iron-sulfur oxidase for L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis (strain 168) (see paper)
LUTC_BACSU / O32259 Lactate utilization protein C from Bacillus subtilis (strain 168) (see paper)
    43% identity, 99% coverage of query (196 bits)

YkgG / b0308 DUF162 domain-containing lactate utilization protein YkgG from Escherichia coli K-12 substr. MG1655 (see 3 papers)
    37% identity, 98% coverage of query (129 bits)

Build an alignment

Build an alignment for WP_035700910.1 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory