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Searching for up to 100 curated homologs for WP_037571724.1 NCBI__GCF_000744815.1:WP_037571724.1 (277 a.a.)

Found high-coverage hits (≥70%) to 18 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

D6Y7Y8 uronate dehydrogenase (EC 1.1.1.203) from Thermobispora bispora (see paper)
    55% identity, 95% coverage of query (271 bits)

udh / Q888H1 uronic acid dehydrogenase subunit (EC 1.1.1.203) from Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) (see 2 papers)
URODH_PSESM / Q888H1 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) (see paper)
Q888H1 uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas syringae pv. tomato (see 4 papers)
    47% identity, 95% coverage of query (224 bits)

Pf1N1B4_4511 D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas fluorescens FW300-N1B4
    48% identity, 95% coverage of query (223 bits)

PP_1171 Uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida KT2440
URODH_PSEPK / Q88NN6 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
Q88NN6 uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida KT2440 (see paper)
    46% identity, 95% coverage of query (216 bits)

PS417_17360 D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas simiae WCS417
    45% identity, 95% coverage of query (214 bits)

HSERO_RS23040 D-galacturonate dehydrogenase (EC 1.1.1.203) from Herbaspirillum seropedicae SmR1
    44% identity, 95% coverage of query (206 bits)

3rfvA / Q7CRQ0 Crystal structure of uronate dehydrogenase from agrobacterium tumefaciens complexed with nadh and product (see paper)
    43% identity, 98% coverage of query (194 bits)

udh / Q7CRQ0 D-uronate dehydrogenase moomer (EC 1.1.1.203) from Agrobacterium fabrum (strain C58 / ATCC 33970) (see 6 papers)
URODH_AGRFC / Q7CRQ0 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see 4 papers)
Q7CRQ0 uronate dehydrogenase (EC 1.1.1.203) from Agrobacterium tumefaciens (see 4 papers)
    43% identity, 97% coverage of query (194 bits)

3rfxA Crystal structure of uronate dehydrogenase from agrobacterium tumefaciens, y136a mutant complexed with NAD
    42% identity, 98% coverage of query (191 bits)

azf / D4GS48 NAD-dependent glucose-6-phosphate dehydrogenase monomer (EC 1.1.1.388) from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (see paper)
G6PD_HALVD / D4GS48 NAD-dependent glucose-6-phosphate dehydrogenase; Glc6PDH; Archaeal zwischenferment; EC 1.1.1.388 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
D4GS48 glucose-6-phosphate dehydrogenase (NAD+) (EC 1.1.1.388) from Haloferax volcanii (see paper)
    38% identity, 87% coverage of query (146 bits)

xacB / D4GP33 L-arabinose 1-dehydrogenase (NADP+) monomer (EC 1.1.1.376) from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (see 3 papers)
ARADH_HALVD / D4GP33 L-arabinose 1-dehydrogenase (NAD(P)(+)); L-AraDH; EC 1.1.1.376 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see 2 papers)
D4GP33 L-arabinose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.376); L-arabinose 1-dehydrogenase (EC 1.1.1.46) from Haloferax volcanii (see paper)
    36% identity, 84% coverage of query (131 bits)

Build an alignment

Build an alignment for WP_037571724.1 and 11 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

3BHD_MYCNE / P0DX24 3-beta-hydroxysteroid dehydrogenase; 3beta-HSD; EC 1.1.1.51 from Mycolicibacterium neoaurum (Mycobacterium neoaurum) (see paper)
    26% identity, 91% coverage of query (61.2 bits)

hsdD / P9WQP7 3 β-hydroxysteroid dehydrogenase (EC 5.3.3.1; EC 1.1.1.145) from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
3BHS_MYCTU / P9WQP7 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase; Cholesterol dehydrogenase; EC 1.1.1.145; EC 5.3.3.1 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
P9WQP7 3beta-hydroxy-DELTA5-steroid dehydrogenase (EC 1.1.1.145) from Mycobacterium tuberculosis (see paper)
    27% identity, 76% coverage of query (59.3 bits)

CHMD_STRBI / Q5SFA6 dTDP-4-dehydro-6-deoxy-D-allose reductase; dTDP-4-dehydro-6-deoxy-alpha-D-gulose 4-ketoreductase; dTDP-4-keto-6-deoxyallose reductase; EC 1.1.1.364 from Streptomyces bikiniensis (see paper)
    29% identity, 70% coverage of query (53.9 bits)

1r6dA Crystal structure of desiv double mutant (dtdp-glucose 4,6- dehydratase) from streptomyces venezuelae with NAD and dau bound
    27% identity, 80% coverage of query (52.0 bits)

desIV / Q9ZGH3 dTDP-glucose 4,6-dehydratase monomer (EC 4.2.1.46) from Streptomyces venezuelae (see paper)
    27% identity, 80% coverage of query (50.1 bits)

1r66A / Q9ZGH3 Crystal structure of desiv (dtdp-glucose 4,6-dehydratase) from streptomyces venezuelae with NAD and tyd bound (see paper)
    27% identity, 80% coverage of query (49.7 bits)

tylA2 / Q54144 dTDP-glucose 4,6-dehydratase monomer (EC 4.2.1.46) from Streptomyces fradiae (see 2 papers)
    25% identity, 80% coverage of query (47.4 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory