Searching for up to 100 curated homologs for WP_047212489.1 NCBI__GCF_001931675.1:WP_047212489.1 (280 a.a.)
Found high-coverage hits (≥70%) to 17 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
G2IQQ3 protocatechuate 4,5-dioxygenase (subunit 1/2) (EC 1.13.11.8) from Sphingobium sp. (see paper)
54% identity, 99% coverage of query (337 bits)
ligB / P22636 protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) from Sphingobium sp. (strain NBRC 103272 / SYK-6) (see 2 papers)
ligB / BAB88743.1 beta subunit of protocatechuate 4,5-dioxygenase from Sphingomonas paucimobilis (see 5 papers)
54% identity, 99% coverage of query (337 bits)
1b4uB / P22636 Protocatechuate 4,5-dioxygenase (ligab) in complex with protocatechuate (pca) (see paper)
54% identity, 99% coverage of query (334 bits)
AAK73573.1 PmdB from Comamonas testosteroni (see paper)
55% identity, 100% coverage of query (325 bits)
PmdB / Q8RNX9 protocatechuate 4,5-dioxygenase β subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni (see paper)
proOb / BAD04058.1 beta subunit of protocatechuate 4,5-dioxygenase from Pseudomonas straminea (see paper)
55% identity, 100% coverage of query (325 bits)
pmdB / BAI50715.1 protocatechuate 4,5-dioxygenase beta subunit from Comamonas sp. E6 (see paper)
55% identity, 100% coverage of query (325 bits)
desB / Q5NTE5 gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis (see paper)
G2IKE5 gallate dioxygenase (EC 1.13.11.57) from Sphingobium sp. SYK-6 (see paper)
Q5NTE5 gallate dioxygenase (EC 1.13.11.57) from Sphingomonas paucimobilis (see paper)
desB / BAD80871.1 gallate dioxygenase from Sphingomonas paucimobilis (see 2 papers)
44% identity, 100% coverage of query (247 bits)
3wr9A / G2IKE5 Crystal structure of the anaerobic desb-gallate complex (see paper)
44% identity, 99% coverage of query (245 bits)
3wkuA Crystal structure of the anaerobic desb-gallate complex
44% identity, 99% coverage of query (238 bits)
gllA / Q88JX5 gallate dioxygenase monomer (EC 1.13.11.57) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
GALA_PSEPK / Q88JX5 Gallate dioxygenase; Gallate degradation protein A; EC 1.13.11.57 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 2 papers)
46% identity, 70% coverage of query (174 bits)
carBb / Q8GI18 2'-aminobiphenyl-2,3-diol 1,2-dioxygenase Bb subunit (EC 1.13.11.39) from Pseudomonas resinovorans (see 2 papers)
carBb / BAC41547.1 catalytic subunit of meta cleavage enzyme from Pseudomonas resinovorans (see 9 papers)
31% identity, 94% coverage of query (122 bits)
Build an alignment for WP_047212489.1 and 11 homologs with ≥ 30% identity
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flnD1 / BAD51800.1 extradiol dioxygenase large subunit from Rhodococcus sp. DFA3 (see paper)
28% identity, 90% coverage of query (87.8 bits)
bphC6 / BAD10908.1 2, 3-dihydroxybiphenyl 1, 2-dioxygenase from Rhodococcus rhodochrous (see paper)
28% identity, 90% coverage of query (86.7 bits)
flnD1 / BAC75996.1 extradiol dioxygenase large subunit from Terrabacter sp. DBF63 (see paper)
28% identity, 90% coverage of query (83.6 bits)
ligZ / O82834 2,2',3-trihydroxy-3'-methoxy-5,5'-dicarboxybiphenyl dioxygenase from Sphingomonas paucimobilis (see paper)
ligZ / BAA31862.1 biphenyl ring cleavage enzyme from Sphingomonas paucimobilis (see paper)
29% identity, 79% coverage of query (68.2 bits)
desZ / Q7WYU8 3-O-methylgallate 3,4-dioxygenase from Sphingomonas paucimobilis (see paper)
26% identity, 73% coverage of query (65.9 bits)
MHPB_COMTE / Q9S157 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase; 3-carboxyethylcatechol 2,3-dioxygenase; EC 1.13.11.16 from Comamonas testosteroni (Pseudomonas testosteroni) (see paper)
25% identity, 83% coverage of query (65.9 bits)
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Lawrence Berkeley National Laboratory