Sites on a Tree

 

Searching for up to 100 curated homologs for WP_050461786.1 NCBI__GCF_001189915.1:WP_050461786.1 (93 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Shew_2372 small component of L-lactate and L-malate uptake system from Shewanella loihica PV-4
    32% identity, 76% coverage of query (55.1 bits)

Sama_1522 small component of lactate uptake system from Shewanella amazonensis SB2B
    31% identity, 76% coverage of query (53.1 bits)

Build an alignment

Build an alignment for WP_050461786.1 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory