Searching for up to 100 curated homologs for WP_058932579.1 NCBI__GCF_001484605.1:WP_058932579.1 (234 a.a.)
Found high-coverage hits (≥70%) to 35 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
C4B4W3 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Corynebacterium glutamicum (see paper)
65% identity, 95% coverage of query (295 bits)
YjfX / b4198 L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
ulaF / P39306 L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli (strain K12) (see paper)
ULAF_ECOLI / P39306 L-ribulose-5-phosphate 4-epimerase UlaF; L-ascorbate utilization protein F; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli (strain K12) (see 3 papers)
42% identity, 91% coverage of query (156 bits)
ARAD_BACSU / P94525 L-ribulose-5-phosphate 4-epimerase; Phosphoribulose isomerase; EC 5.1.3.4 from Bacillus subtilis (strain 168) (see paper)
39% identity, 87% coverage of query (140 bits)
Shewana3_2065 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Shewanella sp. ANA-3
38% identity, 93% coverage of query (137 bits)
CA265_RS08620 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Pedobacter sp. GW460-11-11-14-LB5
38% identity, 84% coverage of query (132 bits)
AraD / b0061 L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli K-12 substr. MG1655 (see 19 papers)
araD / P08203 L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli (strain K12) (see 18 papers)
ARAD_ECOLI / P08203 L-ribulose-5-phosphate 4-epimerase AraD; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli (strain K12) (see 11 papers)
araD / GB|BAB96630.1 L-ribulose-5-phosphate 4-epimerase; EC 5.1.3.4 from Escherichia coli K12 (see paper)
38% identity, 94% coverage of query (126 bits)
1jdiA / P08203 Crystal structure of l-ribulose-5-phosphate 4-epimerase (see paper)
38% identity, 91% coverage of query (124 bits)
YiaS / b3583 L-ribulose-5-phosphate 4-epimerase SgbE (EC 5.1.3.4) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
sgbE / P37680 L-ribulose-5-phosphate 4-epimerase SgbE (EC 5.1.3.4) from Escherichia coli (strain K12) (see 3 papers)
SGBE_ECOLI / P37680 L-ribulose-5-phosphate 4-epimerase SgbE; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli (strain K12) (see 2 papers)
36% identity, 95% coverage of query (122 bits)
Echvi_0503 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Echinicola vietnamensis KMM 6221, DSM 17526
35% identity, 87% coverage of query (122 bits)
Prd / b2800 L-fuculose-phosphate aldolase (EC 4.1.2.17) from Escherichia coli K-12 substr. MG1655 (see 9 papers)
fucA / P0AB87 L-fuculose-phosphate aldolase (EC 4.1.2.17) from Escherichia coli (strain K12) (see 8 papers)
FUCA_ECOLI / P0AB87 L-fuculose phosphate aldolase; D-ribulose-phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Escherichia coli (strain K12) (see 7 papers)
fucA / RF|NP_417280 L-fuculose-1-phosphate aldolase from Escherichia coli K12 (see 3 papers)
32% identity, 87% coverage of query (96.3 bits)
2fuaA / P0AB87 L-fuculose 1-phosphate aldolase crystal form t with cobalt (see paper)
32% identity, 87% coverage of query (96.3 bits)
4fuaA L-fuculose-1-phosphate aldolase complex with pgh
32% identity, 87% coverage of query (96.3 bits)
ald2 / Q2RXI1 5-(methylthio)ribulose-1-phosphate aldolase (EC 4.1.2.62) from Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) (see 2 papers)
ALD2_RHORT / Q2RXI1 5-methylthioribulose-1-phosphate/5-deoxyribulose-1-phosphate aldolase; EC 4.1.2.62 from Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) (see 2 papers)
31% identity, 89% coverage of query (95.1 bits)
Build an alignment for WP_058932579.1 and 13 homologs with ≥ 30% identity
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drdA / P0DTQ0 5-deoxy-D-ribulose 1-phosphate aldolase (EC 4.1.2.62) from Bacillus thuringiensis serovar kurstaki (strain ATCC 35866 / NRRL B-4488 / HD73) (see paper)
DRDA_BACT7 / P0DTQ0 5-deoxy-D-ribulose 1-phosphate aldolase; 5-deoxyribose disposal aldolase; EC 4.1.2.- from Bacillus thuringiensis serovar kurstaki (strain ATCC 35866 / NRRL B-4488 / HD73) (see paper)
P0DTQ0 5-deoxyribulose 1-phosphate aldolase (EC 4.1.2.62) from Bacillus thuringiensis serovar kurstaki (see paper)
27% identity, 95% coverage of query (94.4 bits)
1dzuP L-fuculose-1-phosphate aldolase from escherichia coli mutant t26a
31% identity, 87% coverage of query (94.4 bits)
BWI76_RS22915 L-fuculose phosphate aldolase (EC 4.1.2.17) from Klebsiella michiganensis M5al
33% identity, 81% coverage of query (91.7 bits)
6btgA Crystal structure of deoxyribose-phosphate aldolase bound with dhap from bacillus thuringiensis (see paper)
27% identity, 93% coverage of query (91.3 bits)
F8D9F5 D-ribulose 1-phosphate aldolase (EC 4.1.2.17) from Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) (see paper)
RU1PA_HALXS / F8D9F5 Ribulose-1-phosphate aldolase; Ru1P aldolase; EC 4.1.2.- from Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) (see paper)
31% identity, 94% coverage of query (91.3 bits)
7x78A L-fuculose 1-phosphate aldolase
31% identity, 87% coverage of query (88.6 bits)
ald2 / J7RCN0 5-deoxyribulose 1-phosphate aldolase (EC 4.1.2.62) from Escherichia coli (see paper)
31% identity, 71% coverage of query (82.4 bits)
ALD2_ECO45 / B7MMH7 5-methylthioribulose-1-phosphate/5-deoxyribulose-1-phosphate aldolase; EC 4.1.2.62 from Escherichia coli O45:K1 (strain S88 / ExPEC) (see paper)
31% identity, 71% coverage of query (80.5 bits)
4c25A / A0A0H2US48 L-fuculose 1-phosphate aldolase (see paper)
24% identity, 92% coverage of query (77.8 bits)
OTNC_PECAS / Q6CZ24 3-oxo-tetronate 4-phosphate decarboxylase; EC 4.1.1.104 from Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica) (see paper)
Q6CZ24 3-dehydro-4-phosphotetronate decarboxylase (EC 4.1.1.104) from Pectobacterium atrosepticum (see paper)
28% identity, 86% coverage of query (77.4 bits)
6voqA / Q0QC76 Crystal structure of ygbl, a putative aldolase/epimerase/decarboxylase from klebsiella pneumoniae
29% identity, 83% coverage of query (75.9 bits)
YgbL / b2738 putative 3-oxo-tetronate 4-phosphate decarboxylase YgbL from Escherichia coli K-12 substr. MG1655 (see 2 papers)
29% identity, 82% coverage of query (74.3 bits)
OTNC_ECOL6 / A0A0H2VA12 3-oxo-tetronate 4-phosphate decarboxylase; EC 4.1.1.104 from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
A0A0H2VA12 3-dehydro-4-phosphotetronate decarboxylase (EC 4.1.1.104) from Escherichia coli (see paper)
28% identity, 82% coverage of query (73.6 bits)
4xxfA / A0A0J9X279 L-fuculose 1-phosphate aldolase from glaciozyma antarctica pi12 (see paper)
24% identity, 78% coverage of query (63.2 bits)
BT1274 L-fuculose-1-phosphate aldolase FucA (4.1.2.17); D-ribulose-1-phosphate aldolase from Bacteroides thetaiotaomicron VPI-5482
28% identity, 77% coverage of query (59.3 bits)
otnC / Q57199 3-dehydro-4-phosphotetronate decarboxylase (EC 4.1.1.104) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see paper)
OTNC_HAEIN / Q57199 3-oxo-tetronate 4-phosphate decarboxylase; EC 4.1.1.104 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see paper)
Q57199 3-dehydro-4-phosphotetronate decarboxylase (EC 4.1.1.104) from Haemophilus influenzae (see paper)
28% identity, 74% coverage of query (57.8 bits)
MJ1418 / Q58813 fuculose-1-phosphate aldolase subunit (EC 4.1.2.17) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see paper)
FUCA_METJA / Q58813 L-fuculose phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see 3 papers)
Q58813 L-fuculose-phosphate aldolase (EC 4.1.2.17) from Methanocaldococcus jannaschii (see paper)
25% identity, 81% coverage of query (53.9 bits)
OTNC_CUPNH / Q0KBC9 3-oxo-tetronate 4-phosphate decarboxylase; EC 4.1.1.104 from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (Ralstonia eutropha) (see paper)
Q0KBC9 3-dehydro-4-phosphotetronate decarboxylase (EC 4.1.1.104) from Cupriavidus necator (see paper)
28% identity, 85% coverage of query (52.8 bits)
8il8A / A0A0A2N3A3 Crystal structure of pyruvic oxime dioxygenase (pod) from alcaligenes faecalis
29% identity, 71% coverage of query (52.0 bits)
I7MAL0 methylthioribulose 1-phosphate dehydratase (EC 4.2.1.109) from Tetrahymena thermophila (see paper)
27% identity, 83% coverage of query (48.9 bits)
mlr6791 / Q988D0 3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-decarboxylase monomer (EC 4.1.1.51) from Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) (see paper)
HMPD_RHILO / Q988D0 3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-decarboxylase; HMPDdc; EC 4.1.1.51 from Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) (Mesorhizobium loti (strain MAFF 303099)) (see paper)
27% identity, 81% coverage of query (47.4 bits)
2z7bA / Q988D0 Crystal structure of mesorhizobium loti 3-hydroxy-2-methylpyridine-4, 5-dicarboxylate decarboxylase (see paper)
27% identity, 81% coverage of query (47.4 bits)
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Lawrence Berkeley National Laboratory