Searching for up to 100 curated homologs for WP_078430601.1 NCBI__GCF_002019605.1:WP_078430601.1 (430 a.a.)
Found high-coverage hits (≥70%) to 41 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
7cmyC / Q81GQ9 Isocitrate lyase from bacillus cereus atcc 14579 in complex with magnessium ion, glyoxylate, and succinate
81% identity, 98% coverage of query (728 bits)
6lrtA / A9WDE7 Crystal structure of isocitrate lyase (caur_3889) from chloroflexus aurantiacus in complex with isocitrate and manganese ion
77% identity, 97% coverage of query (685 bits)
Shew_1276 Isocitrate lyase (EC 4.1.3.1) from Shewanella loihica PV-4
69% identity, 99% coverage of query (618 bits)
Icl / b4015 isocitrate lyase (EC 4.1.3.1) from Escherichia coli K-12 substr. MG1655 (see paper)
aceA / P0A9G6 isocitrate lyase (EC 4.1.3.1) from Escherichia coli (strain K12) (see 25 papers)
ACEA_ECOLI / P0A9G6 Isocitrate lyase; ICL; Isocitrase; Isocitratase; EC 4.1.3.1 from Escherichia coli (strain K12) (see 7 papers)
69% identity, 98% coverage of query (613 bits)
Sama_2380 Isocitrate lyase (EC 4.1.3.1) from Shewanella amazonensis SB2B
69% identity, 99% coverage of query (608 bits)
icl / P9WKK7 isocitrate lyase subunit (EC 4.1.3.1) from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
ACEA1_MYCTE / H8EVV4 Isocitrate lyase 1; ICL1; Isocitrase; Isocitratase; Methylisocitrate lyase; MICA; EC 4.1.3.1; EC 4.1.3.30 from Mycobacterium tuberculosis (strain ATCC 35801 / TMC 107 / Erdman) (see paper)
ACEA1_MYCBO / P0A5H4 Isocitrate lyase 1; ICL1; Isocitrase; Isocitratase; EC 4.1.3.1 from Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) (see paper)
ACEA1_MYCTO / P9WKK6 Isocitrate lyase 1; ICL1; Isocitrase; Isocitratase; Methylisocitrate lyase; MICA; EC 4.1.3.1; EC 4.1.3.30 from Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) (see 3 papers)
ACEA_MYCTU / P9WKK7 Isocitrate lyase; ICL; Isocitrase; Isocitratase; EC 4.1.3.1 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 7 papers)
P9WKK7 isocitrate lyase (EC 4.1.3.1) from Mycobacterium tuberculosis (see 4 papers)
68% identity, 100% coverage of query (608 bits)
7rb1A Isocitrate lyase-1 from mycobacterium tuberculosis covalently modified by 5-descarboxy-5-nitro-d-isocitric acid
68% identity, 99% coverage of query (608 bits)
6wsiA Intact cis-2,3-epoxysuccinic acid bound to isocitrate lyase-1 from mycobacterium tuberculosis
68% identity, 99% coverage of query (608 bits)
6vb9A Covalent adduct of cis-2,3-epoxysuccinic acid with isocitrate lyase-1 from mycobacterium tuberculosis
68% identity, 99% coverage of query (608 bits)
5dqlA Crystal structure of 2-vinyl glyoxylate modified isocitrate lyase from mycobacterium tuberculosis
68% identity, 99% coverage of query (608 bits)
6c4aA / P9WKK7 Crystal structure of 3-nitropropionate modified isocitrate lyase from mycobacterium tuberculosis with pyruvate (see paper)
68% identity, 99% coverage of query (607 bits)
SO1484 Isocitrate lyase (EC 4.1.3.1) from Shewanella oneidensis MR-1
68% identity, 98% coverage of query (607 bits)
BWI76_RS01665 Isocitrate lyase (EC 4.1.3.1) from Klebsiella michiganensis M5al
69% identity, 98% coverage of query (605 bits)
6xppA Crystal structure of itaconate modified mycobaterium tuberculosis isocitrate lyase
69% identity, 99% coverage of query (605 bits)
1f8iA Crystal structure of isocitrate lyase:nitropropionate:glyoxylate complex from mycobacterium tuberculosis
68% identity, 99% coverage of query (602 bits)
7rbxC / Q2YQA0 Crystal structure of isocitrate lyase and phosphorylmutase:isocitrate lyase from brucella melitensis biovar abortus 2308 bound to itaconic acid (see paper)
70% identity, 95% coverage of query (598 bits)
Q8RPZ0 isocitrate lyase (EC 4.1.3.1) from Streptomyces clavuligerus (see paper)
68% identity, 98% coverage of query (595 bits)
Pf1N1B4_4042 Isocitrate lyase (EC 4.1.3.1) from Pseudomonas fluorescens FW300-N1B4
65% identity, 98% coverage of query (593 bits)
A0A3S5YB92 isocitrate lyase (EC 4.1.3.1) from Rhodococcus hoagii (see paper)
66% identity, 100% coverage of query (589 bits)
1igwC / P0A9G6 Crystal structure of the isocitrate lyase from the a219c mutant of escherichia coli (see paper)
69% identity, 94% coverage of query (585 bits)
ACEA_CORGL / P42449 Isocitrate lyase; ICL; Isocitrase; Isocitratase; EC 4.1.3.1 from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534) (see 3 papers)
65% identity, 100% coverage of query (577 bits)
Q97YI8 isocitrate lyase (EC 4.1.3.1) from Saccharolobus solfataricus (see paper)
64% identity, 98% coverage of query (572 bits)
icl / CAA82555.1 isocitrate lyase from Rhodococcus fascians (see paper)
64% identity, 100% coverage of query (570 bits)
GCP_CAEEL / Q10663 Bifunctional glyoxylate cycle protein; Gex-3-interacting protein 7; EC 4.1.3.1; EC 2.3.3.9 from Caenorhabditis elegans (see 2 papers)
65% identity, 95% coverage of query (567 bits)
1igwA / P0A9G6 Crystal structure of the isocitrate lyase from the a219c mutant of escherichia coli (see paper)
65% identity, 94% coverage of query (536 bits)
Ac3H11_2831 Isocitrate lyase (EC 4.1.3.1) from Acidovorax sp. GW101-3H11
59% identity, 98% coverage of query (536 bits)
5e9gD / P0CT06 Structural insights of isocitrate lyases from magnaporthe oryzae (see paper)
37% identity, 92% coverage of query (283 bits)
5e9fD / P0CT06 Structural insights of isocitrate lyases from magnaporthe oryzae (see paper)
37% identity, 92% coverage of query (273 bits)
Build an alignment for WP_078430601.1 and 28 homologs with ≥ 30% identity
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ACEA_HYPME / O50078 Isocitrate lyase; ICL; Isocitrase; Isocitratase; EC 4.1.3.1 from Hyphomicrobium methylovorum (see paper)
29% identity, 80% coverage of query (148 bits)
Psest_2014 Isocitrate lyase (EC 4.1.3.1) from Pseudomonas stutzeri RCH2
26% identity, 84% coverage of query (125 bits)
A8C781 isocitrate lyase (EC 4.1.3.1) from Azotobacter vinelandii (see paper)
25% identity, 90% coverage of query (124 bits)
A8C5K8 isocitrate lyase (EC 4.1.3.1) from Colwellia psychrerythraea (see paper)
28% identity, 77% coverage of query (124 bits)
Q9I0K4 isocitrate lyase (EC 4.1.3.1) from Pseudomonas aeruginosa (see 2 papers)
25% identity, 93% coverage of query (124 bits)
ACEA_HALVD / D4GTL3 Isocitrate lyase; ICL; Isocitrase; Isocitratase; EC 4.1.3.1 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see 2 papers)
29% identity, 73% coverage of query (120 bits)
6g1oA / Q9I0K4 Structure of pseudomonas aeruginosa isocitrate lyase, icl (see paper)
27% identity, 73% coverage of query (119 bits)
prpB / Q0KAG5 2-methylcitrate lyase (EC 4.1.3.30) from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (see paper)
26% identity, 71% coverage of query (78.2 bits)
PRPB_CUPNE / Q937P0 2-methylisocitrate lyase; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Cupriavidus necator (Alcaligenes eutrophus) (Ralstonia eutropha) (see paper)
26% identity, 71% coverage of query (76.6 bits)
RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) from Cupriavidus basilensis FW507-4G11
25% identity, 71% coverage of query (76.3 bits)
dml / Q0QLE4 2,3-dimethylmalate lyase subunit (EC 4.1.3.32) from Eubacterium barkeri (see 2 papers)
DML_EUBBA / Q0QLE4 2,3-dimethylmalate lyase; EC 4.1.3.32 from Eubacterium barkeri (Clostridium barkeri) (see 3 papers)
25% identity, 71% coverage of query (74.3 bits)
PRPB_SHEON / Q8EJW1 2-methylisocitrate lyase; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) (see paper)
25% identity, 72% coverage of query (71.2 bits)
6t4vC / Q9I5E2 Crystal structure of 2-methylisocitrate lyase (prpb) from pseudomonas aeruginosa in apo form.
25% identity, 70% coverage of query (55.5 bits)
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Lawrence Berkeley National Laboratory