Searching for up to 100 curated homologs for WP_084456648.1 NCBI__GCF_000429965.1:WP_084456648.1 (330 a.a.)
Found high-coverage hits (≥70%) to 100 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
TC 3.A.1.5.15 / Q9X272 TM1750, component of Probable mannose/mannoside porter. Induced by beta-mannan (Conners et al., 2005). Regulated by mannose-responsive regulator manR (see paper)
45% identity, 96% coverage of query (276 bits)
TC 3.A.1.5.20 / P42065 AppF, component of 5-6 amino acyl oligopeptide transporter AppA-F from Bacillus subtilis (see 3 papers)
45% identity, 95% coverage of query (270 bits)
TC 3.A.1.5.29 / Q9WXR3 Oligopeptide ABC transporter, ATP-binding protein, component of Probable xylan oligosaccharide porter (Conners et al. 2005). Induced by cylan and xylose. Regulated by xylose-responsive regulator XylR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
43% identity, 95% coverage of query (266 bits)
Q5V9R8 ABC-type oligopeptide transporter (EC 7.4.2.6) from Vibrio fluvialis (see paper)
TC 3.A.1.5.22 / Q5V9R8 OppF, component of The peptide transporter OppA,B,C,D,F (influences biofilm formation; Lee et al., 2004). Similar to 3.A.1.5.1, OppA is similar to the Vibrio furnissii OppA that provides several functions: hemolysis, antibiotic resistance, and virulence from Vibrio fluvialis (see paper)
45% identity, 95% coverage of query (262 bits)
OPPF_SALTY / P08007 Oligopeptide transport ATP-binding protein OppF; EC 7.4.2.6 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 3 papers)
TC 3.A.1.5.1 / P08007 OppF aka STM1742, component of Oligopeptide porter (also takes up amino glycoside antibiotics such as kanamycin, streptomycin and neomycin as well as cell wall-derived peptides such as murein tripeptide). It transports substrate peptides of 2-5 amino acids with highest affinity for tripeptides. Also transports δ-aminolevulinic acid (ALA). [May be regulated by PTS Enzyme INtr-aspartokinase.] ATP-binding to OppDF may result in donation of peptide to OppBC and simultaneous release of OppA from Salmonella typhimurium (see 2 papers)
47% identity, 95% coverage of query (261 bits)
TC 3.A.1.5.37 / B1W1L8 Putative peptide ABC transporter ATP-binding protein, component of The ABC BldKA-E (SGR_2418-2414) oligopeptide transport system. It controls aerial mycelium formation on glucose media. Probably involved in extracellular peptide signalling (Akanuma et al. 2011). Probably orthologous to 3.A.1.5.35 from Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
43% identity, 97% coverage of query (258 bits)
TC 3.A.1.5.36 / Q8CJS2 Putative peptide transport system ATP-binding subunit, component of Peptide transporter encoded adjacent to the putative transport system with TC#3.A.1.5.35 (Akanuma et al. 2011). Induced by exogenous S-adenosylmethionine (SAM) at a concentration of 2muM which also enhanced antibiotic production and inhibited morphological development (Park et al. 2005). SAM can be imported into cells. Mutants in the bldK genes confer resistance to the toxic tripeptide, bialaphos from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
44% identity, 94% coverage of query (257 bits)
TC 3.A.1.5.12 / Q9X0F3 TM1063, component of Probable rhamnose oligosaccharide porter. Induced by rhamnose (see paper)
45% identity, 95% coverage of query (257 bits)
OppF / b1247 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppF (EC 7.4.2.6) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
oppF / P77737 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppF (EC 7.4.2.6) from Escherichia coli (strain K12) (see 2 papers)
OPPF_ECOLI / P77737 Oligopeptide transport ATP-binding protein OppF; EC 7.4.2.6 from Escherichia coli (strain K12) (see paper)
TC 3.A.1.5.41 / P77737 Oligopeptide transport ATP-binding protein OppF, component of Oligopeptide transporter, OppABCDF/MppA/YgiS from Escherichia coli (strain K12)
46% identity, 95% coverage of query (257 bits)
TC 3.A.1.5.27 / P45094 Dipeptide transport ATP-binding protein DppF, component of The glutathione uptake porter, DppBCDF with the glutathione binding protein, DppA (GbpA; HbpA). Takes up reduced (GSH) and oxidized (GSSG) but not bulky glutathione S conjugates or glutathione derivatives with C-terminal modifications from Haemophilus influenzae (see 2 papers)
43% identity, 91% coverage of query (243 bits)
DPPF_PSEAB / A0A0H2ZH52 Di/tripeptide transport ATP-binding protein DppF; EC 7.4.2.9 from Pseudomonas aeruginosa (strain UCBPP-PA14) (see paper)
42% identity, 95% coverage of query (242 bits)
TC 3.A.1.5.39 / W0WLZ8 Dipeptide transport ATP-binding protein DppF, component of Di- and tri-peptide transporter, DppBCDF with periplasmic substrate binding receptors, A1, A3, A5, A7 and A9, each with differing specificities for peptides from Pseudomonas aeruginosa MH38
42% identity, 95% coverage of query (242 bits)
TC 3.A.1.5.18 / O31310 OppF, component of The oligopeptide transporter OppA1-5, B1, C1, DF (functions with five binding proteins of differing induction properties and peptide specificities; OppA1-3 are chromosomally encoded; OppA4 and 5 are plasmid encoded.) from Borrelia burgdorferi (Lyme disease spirochete) (see 2 papers)
42% identity, 97% coverage of query (242 bits)
DppF / b3540 dipeptide ABC transporter ATP binding subunit DppF (EC 7.4.2.9) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
DppF / P37313 dipeptide ABC transporter ATP binding subunit DppF (EC 7.4.2.9) from Escherichia coli (strain K12) (see 2 papers)
DPPF_ECOLI / P37313 Dipeptide transport ATP-binding protein DppF; EC 7.4.2.9 from Escherichia coli (strain K12) (see 3 papers)
41% identity, 98% coverage of query (237 bits)
TC 3.A.1.5.19 / Q2FZR4 OppF, component of The major oligopeptide uptake porter, Opp-3 (of four paralogues, this is the only one that mediates nitrogen nutrition from Staphylococcus aureus (strain NCTC 8325)
44% identity, 78% coverage of query (234 bits)
OPPF_BACSU / P24137 Oligopeptide transport ATP-binding protein OppF; Stage 0 sporulation protein KE; EC 7.4.2.6 from Bacillus subtilis (strain 168) (see 3 papers)
41% identity, 95% coverage of query (233 bits)
Q73NS6 ABC-type dipeptide transporter (EC 7.4.2.9) from Treponema denticola (see paper)
37% identity, 92% coverage of query (230 bits)
TC 3.A.1.5.15 / Q9X271 TM1749, component of Probable mannose/mannoside porter. Induced by beta-mannan (Conners et al., 2005). Regulated by mannose-responsive regulator manR (see paper)
39% identity, 95% coverage of query (224 bits)
DPPF_LACLM / A2RI78 Dipeptide transport ATP-binding protein DppF; EC 7.4.2.9 from Lactococcus lactis subsp. cremoris (strain MG1363) (see paper)
43% identity, 78% coverage of query (220 bits)
TC 3.A.1.5.25 / Q9CIK8 Oligopeptide ABC trasporter ATP binding protein, component of The ABC peptide/signalling peptide transporter. OptA binds peptides of 3-6 aas; OptS binds dipeptides. OptB,C,D are most similar to 3.A.1.5.19 from Lactococcus lactis subsp. lactis (see paper)
43% identity, 78% coverage of query (219 bits)
TC 3.A.1.5.13 / Q9WXT0 TM0075, component of Probable xylan oligosaccharide porter (Conners et al., 2005). Induced by xylan and xylose. Regulated by xylose-responsive regulator XylR (see paper)
37% identity, 95% coverage of query (219 bits)
GsiA / b0829 glutathione ABC transporter ATP binding subunit GsiA (EC 7.4.2.10) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
gsiA / P75796 glutathione ABC transporter ATP binding subunit GsiA (EC 7.4.2.10) from Escherichia coli (strain K12) (see 3 papers)
GSIA_ECOLI / P75796 Glutathione import ATP-binding protein GsiA; EC 7.4.2.10 from Escherichia coli (strain K12) (see paper)
P75796 ABC-type glutathione transporter (EC 7.4.2.10) from Escherichia coli (see paper)
TC 3.A.1.5.11 / P75796 Hypothetical ABC transporter ATP-binding protein yliA, component of Glutathione porter, YliABCD or GsiABCD from Escherichia coli (see 4 papers)
43% identity, 85% coverage of query (219 bits)
TC 3.A.1.5.29 / Q9WXR4 Oligopeptide ABC transporter, ATP-binding protein, component of Probable xylan oligosaccharide porter (Conners et al. 2005). Induced by cylan and xylose. Regulated by xylose-responsive regulator XylR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
40% identity, 95% coverage of query (218 bits)
DdpF / b1483 putative D,D-dipeptide ABC transporter ATP-binding subunit DdpF from Escherichia coli K-12 substr. MG1655 (see 2 papers)
DDPF_ECOLI / P77622 Probable D,D-dipeptide transport ATP-binding protein DdpF from Escherichia coli (strain K12) (see paper)
41% identity, 95% coverage of query (217 bits)
Q8ZQM4 ABC-type glutathione transporter (EC 7.4.2.10) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
43% identity, 89% coverage of query (214 bits)
TC 3.A.1.5.14 / Q9X0U6 TM1219, component of Probable cellobiose porter. Induced by barley, glucomannan (see paper)
36% identity, 95% coverage of query (211 bits)
TC 3.A.1.5.37 / B1W1L9 Putative peptide ABC transporter ATP-binding protein, component of The ABC BldKA-E (SGR_2418-2414) oligopeptide transport system. It controls aerial mycelium formation on glucose media. Probably involved in extracellular peptide signalling (Akanuma et al. 2011). Probably orthologous to 3.A.1.5.35 from Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
39% identity, 97% coverage of query (208 bits)
A0A150QXP6 5-(carboxyamino)imidazole ribonucleotide mutase (EC 5.4.99.18) from Bacillus anthracis (see paper)
40% identity, 95% coverage of query (207 bits)
TC 3.A.1.5.27 / P45095 Dipeptide transport ATP-binding protein DppD, component of The glutathione uptake porter, DppBCDF with the glutathione binding protein, DppA (GbpA; HbpA). Takes up reduced (GSH) and oxidized (GSSG) but not bulky glutathione S conjugates or glutathione derivatives with C-terminal modifications from Haemophilus influenzae (see 2 papers)
37% identity, 97% coverage of query (204 bits)
TC 3.A.1.5.12 / Q9X0F4 TM1064, component of Probable rhamnose oligosaccharide porter. Induced by rhamnose (see paper)
38% identity, 95% coverage of query (204 bits)
OppD / b1246 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppD (EC 7.4.2.6) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
oppD / P76027 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppD (EC 7.4.2.6) from Escherichia coli (strain K12) (see 2 papers)
OPPD_ECOLI / P76027 Oligopeptide transport ATP-binding protein OppD; EC 7.4.2.6 from Escherichia coli (strain K12) (see paper)
TC 3.A.1.5.41 / P76027 Oligopeptide transport ATP-binding protein OppD, component of Oligopeptide transporter, OppABCDF/MppA/YgiS from Escherichia coli (strain K12)
oppD oligopeptide ABC transporter, ATP-binding protein OppD from Escherichia coli K12 (see paper)
38% identity, 97% coverage of query (200 bits)
YEJF_AGRFC / A9CKL2 Peptidoglycan transport ATP-binding protein YejF; EC 7.4.2.- from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see paper)
43% identity, 78% coverage of query (200 bits)
8j5qD / P9WQJ5 Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- translocation state (see paper)
46% identity, 73% coverage of query (195 bits)
8j5tD Cryo-em structure of mycobacterium tuberculosis oppabcd in the catalytic intermediate state
45% identity, 72% coverage of query (191 bits)
8j5sD Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- catalytic intermediate state
45% identity, 72% coverage of query (191 bits)
4fwiB / Q8RDH4 Crystal structure of the nucleotide-binding domain of a dipeptide abc transporter (see paper)
35% identity, 95% coverage of query (182 bits)
DPPD_CALS4 / Q8RDH4 Dipeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis) (see paper)
34% identity, 95% coverage of query (179 bits)
SapD / b1291 putrescine ABC exporter ATP binding protein SapD (EC 7.6.2.16) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
SapD / P0AAH4 putrescine ABC exporter ATP binding protein SapD (EC 7.6.2.16) from Escherichia coli (strain K12) (see 5 papers)
SAPD_ECOLI / P0AAH4 Putrescine export system ATP-binding protein SapD from Escherichia coli (strain K12) (see 2 papers)
34% identity, 96% coverage of query (175 bits)
MetN / b0199 L-methionine/D-methionine ABC transporter ATP binding subunit (EC 7.4.2.11) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
MetN / P30750 L-methionine/D-methionine ABC transporter ATP binding subunit (EC 7.4.2.11) from Escherichia coli (strain K12) (see 3 papers)
METN_ECOLI / P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 7 papers)
P30750 ABC-type methionine transporter (subunit 2/2) (EC 7.4.2.11) from Escherichia coli (see 3 papers)
TC 3.A.1.24.1 / P30750 MetN, D-methionine transport ATP-binding protein, component of The L- and D-methionine porter (also transports formyl-L-methionine and other methionine derivatives) (Zhang et al., 2003). The 3.7A structure of MetNI has been solved. An allosteric regulatory mechanism operates at the level of transport activity, so increased intracellular levels of the transported ligand stabilize an inward-facing, ATPase-inactive state of MetNI to inhibit further ligand translocation into the cell from Escherichia coli (see 5 papers)
38% identity, 76% coverage of query (156 bits)
6cvlD / P30750 Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
38% identity, 76% coverage of query (154 bits)
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form
38% identity, 76% coverage of query (154 bits)
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form
38% identity, 76% coverage of query (154 bits)
ECFA1_STRT2 / Q5M243 Energy-coupling factor transporter ATP-binding protein EcfA1; ECF transporter A component EcfA1; EC 7.-.-.- from Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) (see paper)
TC 3.A.1.25.6 / Q5M243 Energy-coupling factor transporter ATP-binding protein EcfA 2, component of Riboflavin ECF transport system, EcfAA'T/RibU from Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)
35% identity, 73% coverage of query (131 bits)
4ymuJ / Q8RCC2 Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
31% identity, 75% coverage of query (123 bits)
4u00A / Q5SJ55 Crystal structure of ttha1159 in complex with adp (see paper)
32% identity, 76% coverage of query (119 bits)
3c4jA Abc protein artp in complex with atp-gamma-s
30% identity, 76% coverage of query (115 bits)
3c41J / D0VWX4 Abc protein artp in complex with amp-pnp/mg2+
30% identity, 76% coverage of query (115 bits)
2olkA Abc protein artp in complex with adp-beta-s
30% identity, 76% coverage of query (115 bits)
2oljA Abc protein artp in complex with adp/mg2+
30% identity, 76% coverage of query (115 bits)
PotA / b1126 spermidine preferential ABC transporter ATP binding subunit (EC 7.6.2.11; EC 7.6.2.16) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
PotA / P69874 spermidine preferential ABC transporter ATP binding subunit (EC 7.6.2.11) from Escherichia coli (strain K12) (see 5 papers)
POTA_ECOLI / P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 6 papers)
TC 3.A.1.11.1 / P69874 Spermidine/putrescine import ATP-binding protein PotA aka B1126, component of Polyamine (putrescine/spermidine) uptake porter from Escherichia coli (see 9 papers)
potA / MB|P69874 spermidine/putrescine ABC transporter, ATP-binding protein PotA; EC 3.6.3.31 from Escherichia coli K12 (see 10 papers)
32% identity, 74% coverage of query (115 bits)
2d62A / O57933 Crystal structure of multiple sugar binding transport atp- binding protein
31% identity, 73% coverage of query (114 bits)
1oxvD Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus
31% identity, 74% coverage of query (113 bits)
1oxvA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus
31% identity, 74% coverage of query (113 bits)
GLCV_SACS2 / Q97UY8 Glucose import ATP-binding protein GlcV; EC 7.5.2.- from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
TC 3.A.1.1.13 / Q97UY8 GlcV, component of Glucose, mannose, galactose porter from Sulfolobus solfataricus (see 3 papers)
1oxuA / Q97UY8 Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
31% identity, 74% coverage of query (113 bits)
P0AAH0 Phosphate import ATP-binding protein PstB; ABC phosphate transporter; Phosphate-transporting ATPase; EC 7.3.2.1 from Escherichia coli (strain K12)
30% identity, 73% coverage of query (104 bits)
Build an alignment for WP_084456648.1 and 55 homologs with ≥ 30% identity
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7zkaA Abcb1 v978c mutant (mabcb1) in the outward facing state bound to aac
29% identity, 73% coverage of query (101 bits)
7zk6A Abcb1 l335c mutant (mabcb1) in the outward facing state bound to 2 molecules of aac
29% identity, 73% coverage of query (101 bits)
7zk5A Abcb1 l335c mutant (mabcb1) in the outward facing state bound to aac
29% identity, 73% coverage of query (101 bits)
8hplC / A0R2C0 Lpqy-sugabc in state 1 (see paper)
31% identity, 75% coverage of query (99.8 bits)
8hprD Lpqy-sugabc in state 4
31% identity, 75% coverage of query (99.8 bits)
8hprC Lpqy-sugabc in state 4
31% identity, 75% coverage of query (99.4 bits)
6q81A Structure of p-glycoprotein(abcb1) in the post-hydrolytic state
29% identity, 77% coverage of query (98.6 bits)
3g61A Structure of p-glycoprotein reveals a molecular basis for poly- specific drug binding
29% identity, 77% coverage of query (98.6 bits)
3g60A Structure of p-glycoprotein reveals a molecular basis for poly- specific drug binding
29% identity, 77% coverage of query (98.6 bits)
6fn1A Zosuquidar and uic2 fab complex of human-mouse chimeric abcb1 (abcb1hm)
28% identity, 73% coverage of query (97.8 bits)
ABCBA_HUMAN / Q9NRK6 ATP-binding cassette sub-family B member 10, mitochondrial; ABC-mitochondrial erythroid protein; ABC-me protein; ATP-binding cassette transporter 10; ABC transporter 10 protein; Mitochondrial ATP-binding cassette 2; M-ABC2 from Homo sapiens (Human) (see 7 papers)
Q9NRK6 bacterial ABC-type protein transporter (EC 7.4.2.5) from Homo sapiens (see paper)
29% identity, 76% coverage of query (97.4 bits)
7otgA Structure of abcb1/p-glycoprotein in the presence of the cftr potentiator ivacaftor
31% identity, 71% coverage of query (97.4 bits)
4xwkA P-glycoprotein co-crystallized with bde-100
31% identity, 71% coverage of query (97.4 bits)
4m1mA / P21447 Corrected structure of mouse p-glycoprotein (see paper)
31% identity, 71% coverage of query (97.1 bits)
4q9iA P-glycoprotein cocrystallised with qz-ala
31% identity, 71% coverage of query (97.1 bits)
7d0aB Acinetobacter mlafedb complex in adp-vanadate trapped vclose conformation
30% identity, 73% coverage of query (97.1 bits)
7d08B / A0A086HZU3 Acinetobacter mlafedb complex in atp-bound vtrans1 conformation (see paper)
30% identity, 73% coverage of query (97.1 bits)
MacB / b0879 ABC-type tripartite efflux pump ATP binding/membrane subunit from Escherichia coli K-12 substr. MG1655 (see 14 papers)
MacB / P75831 ABC-type tripartite efflux pump ATP binding/membrane subunit from Escherichia coli (strain K12) (see 16 papers)
MACB_ECOLI / P75831 Macrolide export ATP-binding/permease protein MacB; EC 7.6.2.- from Escherichia coli (strain K12) (see 5 papers)
TC 3.A.1.122.1 / P75831 MacB aka B0879, component of Macrolide (14- and 15- but not 16-membered lactone macrolides including erythromycin) exporter, MacAB (formerly YbjYZ). Both MacA and MacB are required for activity (Tikhonova et al., 2007). MacAB functions with TolC to export multiple drugs and heat-stable enterotoxin II (enterotoxin STII) (Yamanaka et al., 2008). The crystal structure of MacA is available (Yum et al., 2009). MacB is a dimer whose ATPase activity and macrolide-binding capacity are regulated by the membrane fusion protein MacA (Lin et al., 2009). Xu et al. (2009) have reported the crystal structure of the periplasmic region of MacB which they claim resembles the periplasmic domain of RND-type transporters such as AcrB (TC# 2.A.6.2.2). Also exports L-cysteine (Yamada et al., 2006). The periplasmic membrane proximal domain of MacA acts as a switch in stimulation of ATP hydrolysis by the MacB transporter from Escherichia coli (see 5 papers)
macB / BAB64542.1 macrolide-specific ABC-type efflux carrier from Escherichia coli (see paper)
32% identity, 71% coverage of query (96.7 bits)
6z5uK Cryo-em structure of the a. Baumannii mlabdef complex bound to appnhp
29% identity, 72% coverage of query (96.3 bits)
ABCBA_MOUSE / Q9JI39 ATP-binding cassette sub-family B member 10, mitochondrial; ABC-mitochondrial erythroid protein; ABC-me protein; ATP-binding cassette transporter 10; ABC transporter 10 protein from Mus musculus (Mouse) (see 9 papers)
30% identity, 76% coverage of query (96.3 bits)
5koyA Mouse pgp 34 linker deleted bound with atp
31% identity, 71% coverage of query (95.9 bits)
7zk4A The abcb1 l335c mutant (mabcb1) in the outward facing state
30% identity, 71% coverage of query (95.5 bits)
6qeeA Nanodisc reconstituted human-mouse chimeric abcb1 (abcb1hm)-eq mutant in complex with uic2 fab and zosuquidar.
30% identity, 71% coverage of query (95.5 bits)
7o9wA Encequidar-bound human p-glycoprotein in complex with uic2-fab
31% identity, 71% coverage of query (95.1 bits)
6qexA / P08183 Nanodisc reconstituted human abcb1 in complex with uic2 fab and taxol (see paper)
31% identity, 71% coverage of query (95.1 bits)
7a6fA Nanodisc reconstituted human abcb1 in complex with mrk16 fab and zosuquidar
31% identity, 71% coverage of query (95.1 bits)
7a6eA Nanodisc reconstituted human abcb1 in complex with mrk16 fab and tariquidar
31% identity, 71% coverage of query (95.1 bits)
7a6cA Nanodisc reconstituted human abcb1 in complex with mrk16 fab and elacridar
31% identity, 71% coverage of query (95.1 bits)
7a69A Nanodisc reconstituted human abcb1 in complex with mrk16 fab and vincristine
31% identity, 71% coverage of query (95.1 bits)
6c0vA Molecular structure of human p-glycoprotein in the atp-bound, outward- facing conformation
29% identity, 75% coverage of query (94.4 bits)
ABCBB_RAT / O70127 Bile salt export pump; ATP-binding cassette sub-family B member 11; Sister of P-glycoprotein; EC 7.6.2.- from Rattus norvegicus (Rat) (see 12 papers)
30% identity, 74% coverage of query (93.2 bits)
3vx4D / Q8DW05 Crystal structure of the nucleotide-binding domain of s. Mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway (see paper)
29% identity, 74% coverage of query (92.8 bits)
7qkrA / F2QQK6 Cryo-em structure of abc transporter ste6-2p from pichia pastoris with verapamil at 3.2 a resolution (see paper)
31% identity, 75% coverage of query (92.4 bits)
MALK_SALTY / P19566 Maltose/maltodextrin import ATP-binding protein MalK; EC 7.5.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
27% identity, 75% coverage of query (92.4 bits)
MDR3_HUMAN / P21439 Phosphatidylcholine translocator ABCB4; ATP-binding cassette sub-family B member 4; Multidrug resistance protein 3; P-glycoprotein 3; EC 7.6.2.1 from Homo sapiens (Human) (see 28 papers)
TC 3.A.1.201.3 / P21439 Short chain fatty acid phosphatidylcholine translocase (phospholipid flippase), MDR3; AbcB4; Pgy3 from Homo sapiens (Human) (see 15 papers)
28% identity, 75% coverage of query (92.4 bits)
7niwA / P21439 Nanodisc reconstituted human abcb4 in complex with 4b1-fab (posaconazole-bound, inward-open conformation) (see paper)
29% identity, 77% coverage of query (90.5 bits)
6s7pA Nucleotide bound abcb4
28% identity, 74% coverage of query (89.7 bits)
Q00748 Multidrug resistance protein homolog 65; P-glycoprotein 65; EC 7.6.2.2 from Drosophila melanogaster (Fruit fly)
27% identity, 76% coverage of query (89.4 bits)
AB25B_ARATH / Q9LVM1 ABC transporter B family member 25, mitochondrial; ABC transporter ABCB.25; AtABCB25; ABC transporter of the mitochondrion 3; AtATM3; Iron-sulfur clusters transporter ATM3; Protein STARIK 1 from Arabidopsis thaliana (Mouse-ear cress) (see 6 papers)
TC 3.A.1.210.8 / Q9LVM1 Mitochondrial ABC transporter, ATM3, involved in iron homeostasis (Chen et al. 2007) and heavy metal resistance (Kim et al. 2006). There are three isoforms: ATM1, ATM2 and ATM3 (Chen et al., 2007). ATM3 can replace the yeast iron/sulfur cluster exporter better than ATM1 or ATM2. Atm3 is most similar to the human and yeast homologues, TC# 3.A.1.210.4 and 3.A.1.210.1, 51% and 47% identical, respectively from Arabidopsis thaliana (Mouse-ear cress) (see 11 papers)
GB|AAN13224.1 putative ABC transporter protein from Arabidopsis thaliana (see paper)
27% identity, 72% coverage of query (89.4 bits)
7n59A / Q9LVM1 Structure of atatm3 in the inward-facing conformation with gssg bound (see paper)
27% identity, 72% coverage of query (88.6 bits)
7n5aA Structure of atatm3 in the closed conformation
27% identity, 72% coverage of query (88.2 bits)
8wm7C / Q8YZ76 Cryo-em structure of cyanobacterial nitrate/nitrite transporter nrtbcd in complex with signalling protein pii (see paper)
30% identity, 80% coverage of query (87.8 bits)
TGD3_ARATH / Q9AT00 Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic; ABC transporter I family member 13; ABC transporter ABCI.13; AtABCI13; Non-intrinsic ABC protein 11; AtNAP11 from Arabidopsis thaliana (Mouse-ear cress) (see 6 papers)
TC 3.A.1.27.2 / Q9AT00 Tdg3, component of The chloroplast lipid (trigalactosyl diacyl glycerol (TDG)) transporter, Tdg1,2,3 (Lu et al., 2007). Lipids such as mono- and digalactolipids are synthesized in the endoplasmic reticulum (ER) of plant cells and transferred to the thylakoid membranes of chloroplasts. Mutations in an outer chloroplastic envelope protein with 350 aas and 7 putative TMSs in the last 250 residues may catalyze translocation as part of a lipid transfer complex from Arabidopsis thaliana (Mouse-ear cress) (see 7 papers)
30% identity, 73% coverage of query (87.8 bits)
5lilA / Q2EHL8 Structure of aggregatibacter actinomycetemcomitans macb bound to atpys (p21) (see paper)
28% identity, 73% coverage of query (86.3 bits)
5lj7A / Q2EHL8 Structure of aggregatibacter actinomycetemcomitans macb bound to atp (p21) (see paper)
28% identity, 73% coverage of query (86.3 bits)
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Lawrence Berkeley National Laboratory