Searching for up to 100 curated homologs for WP_085773319.1 NCBI__GCF_002117405.1:WP_085773319.1 (341 a.a.)
Found high-coverage hits (≥70%) to 9 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
AAPJ_RHIJ3 / Q52812 General L-amino acid-binding periplasmic protein AapJ from Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841) (Rhizobium leguminosarum bv. viciae) (see 2 papers)
TC 3.A.1.3.8 / Q52812 AapJ, component of General L-amino acid porter; transports basic and acidic amino acids preferentially, but also transports aliphatic amino acids (catalyzes both uptake and efflux) from Rhizobium leguminosarum (biovar viciae) (see 2 papers)
aapJ / CAA57933.1 general amino acid ABC type transporter from Rhizobium leguminosarum (see paper)
53% identity, 99% coverage of query (380 bits)
SMc02118 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, periplasmic substrate-binding component from Sinorhizobium meliloti 1021
55% identity, 94% coverage of query (377 bits)
4z9nB / A0A0M3KL33 Abc transporter / periplasmic binding protein from brucella ovis with glutathione bound
49% identity, 93% coverage of query (350 bits)
Pf6N2E2_5402 ABC transporter for D-Alanine, periplasmic substrate-binding component from Pseudomonas fluorescens FW300-N2E2
49% identity, 99% coverage of query (337 bits)
TC 3.A.1.3.7 / Q52663 BztA, component of Glutamate/glutamine/aspartate/asparagine porter from Rhodobacter capsulatus (Rhodopseudomonas capsulata) (see paper)
47% identity, 92% coverage of query (296 bits)
TC 3.A.1.3.18 / Q8YPM9 NatF, component of Acidic and neutral amino acid uptake transporter NatFGH/BgtA. BgtA is shared with BgtAB (see paper)
43% identity, 91% coverage of query (285 bits)
Build an alignment for WP_085773319.1 and 6 homologs with ≥ 30% identity
Or download the sequences
cjaA / CAJ20048.1 glutamine-binding protein from Campylobacter jejuni (see paper)
25% identity, 71% coverage of query (72.4 bits)
AO353_21710 ABC transporter for D-glucosamine, periplasmic substrate-binding component from Pseudomonas fluorescens FW300-N2E3
24% identity, 74% coverage of query (70.9 bits)
AO356_00480 ABC transporter for D-Glucosamine, periplasmic substrate-binding component from Pseudomonas fluorescens FW300-N2C3
24% identity, 71% coverage of query (68.6 bits)
Or start over
Lawrence Berkeley National Laboratory