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Searching for up to 100 curated homologs for WP_089300513.1 NCBI__GCF_900188115.1:WP_089300513.1 (283 a.a.)

Found high-coverage hits (≥70%) to 65 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

8pnwA / H6RQF3 Crystal structure of d-amino acid aminotransferase from blastococcus saxobsidens in holo form with plp (see paper)
    52% identity, 88% coverage of query (226 bits)

8pnyA Crystal structure of d-amino acid aminotransferase from blastococcus saxobsidens complexed with phenylhydrazine and in its apo form
    52% identity, 88% coverage of query (226 bits)

8pnxA Crystal structure of d-amino acid aminotransferase from blastococcus saxobsidens in pmp form
    52% identity, 88% coverage of query (226 bits)

6q1rB / Q79FW0 A hypothetical aminotransferase from mycobacterium tuberculosis, plp- bound form
    44% identity, 96% coverage of query (218 bits)

6q1sA A hypothetical aminotransferase from mycobacterium tuberculosis, alpha-ketoglutarate and pmp bound form
    44% identity, 96% coverage of query (218 bits)

A0R4D5 D-amino-acid transaminase (EC 2.6.1.21) from Mycolicibacterium smegmatis (see paper)
    48% identity, 92% coverage of query (215 bits)

BALDT_MYCTU / Q79FW0 Bifunctional aminodeoxychorismate lyase / D-amino acid transaminase; Bifunctional ADCL/DAAT; EC 2.6.1.21; EC 4.1.3.38 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
    44% identity, 96% coverage of query (213 bits)

5k3wA / A0A1S4NYF0 Structural characterisation of fold iv-transaminase, cputa1, from curtobacterium pusillum (see paper)
    45% identity, 94% coverage of query (184 bits)

pabC-2 / B8Y8J0 4-amino-4-deoxychorismate lyase (EC 4.1.3.38) from Streptomyces sp. FR-008 (see 2 papers)
B8Y8J0 aminodeoxychorismate lyase (EC 4.1.3.38) from Streptomyces sp. (see paper)
    38% identity, 92% coverage of query (116 bits)

GB|AAU18968.1 branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus E33L (see paper)
    31% identity, 90% coverage of query (105 bits)

A0A1B1L2T7 branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis (see paper)
    31% identity, 90% coverage of query (105 bits)

ilvE / A6UWA0 branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3) (see 3 papers)
A6UWA0 branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus (see paper)
    31% identity, 90% coverage of query (104 bits)

Build an alignment

Build an alignment for WP_089300513.1 and 12 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

5mr0D / O29329 Thermophilic archaeal branched-chain amino acid transaminases from geoglobus acetivorans and archaeoglobus fulgidus: biochemical and structural characterisation (see paper)
    28% identity, 98% coverage of query (94.4 bits)

E6TUA8 branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica (see paper)
    27% identity, 93% coverage of query (92.0 bits)

5e25A / A0A0A7GJ30 Crystal structure of branched-chain aminotransferase from thermophilic archaea geoglobus acetivorans complexed with alpha-ketoglutarate (see paper)
    27% identity, 91% coverage of query (86.3 bits)

ADCL / Q8L493 aminodeoxychorismate lyase (EC 4.1.3.38) from Arabidopsis thaliana (see 3 papers)
DAAA_ARATH / Q8L493 D-amino-acid transaminase, chloroplastic; Aminodeoxychorismate lyase; AtADCL; Branched-chain-amino-acid aminotransferase-like protein 3; EC 2.6.1.21; EC 4.1.3.38 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
Q8L493 D-amino-acid transaminase (EC 2.6.1.21) from Arabidopsis thaliana (see paper)
    31% identity, 88% coverage of query (84.3 bits)

DAAA_BACYM / P19938 D-alanine aminotransferase; D-amino acid aminotransferase; D-amino acid transaminase; DAAT; D-aspartate aminotransferase; EC 2.6.1.21 from Bacillus sp. (strain YM-1) (see 3 papers)
dat D-alanine aminotransferase; EC 2.6.1.21 from Bacillus sp. YM-1 (see 6 papers)
    26% identity, 94% coverage of query (77.4 bits)

8ahuA / F4KWH0 Crystal structure of d-amino acid aminotrensferase from haliscomenobacter hydrossis complexed with d-cycloserine (see paper)
    26% identity, 90% coverage of query (77.4 bits)

3lqsA Complex structure of d-amino acid aminotransferase and 4-amino-4,5- dihydro-thiophenecarboxylic acid (adta)
    26% identity, 94% coverage of query (77.4 bits)

7p7xA Crystal structure of d-amino acid transaminase from haliscomenobacter hydrossis (holo form).
    26% identity, 90% coverage of query (77.4 bits)

3daaA Crystallographic structure of d-amino acid aminotransferase inactivated by pyridoxyl-d-alanine
    26% identity, 94% coverage of query (77.4 bits)

2daaA Crystallographic structure of d-amino acid aminotransferase inactivated by d-cycloserine
    26% identity, 94% coverage of query (77.4 bits)

1daaA Crystallographic structure of d-amino acid aminotransferase complexed with pyridoxal-5'-phosphate
    26% identity, 94% coverage of query (77.4 bits)

dat / P54693 D-alanine aminotransferase monomer (EC 2.6.1.21) from Lysinibacillus sphaericus (see 7 papers)
    28% identity, 92% coverage of query (76.6 bits)

8raiA Crystal structure of d-amino acid transaminase from haliscomenobacter hydrossis point mutant r90i complexed with phenylhydrazine
    26% identity, 90% coverage of query (75.9 bits)

1a0gB / P19938 L201a mutant of d-amino acid aminotransferase complexed with pyridoxamine-5'-phosphate (see paper)
    25% identity, 94% coverage of query (74.7 bits)

8yrvA Crystal structure of d-amino acid transaminase from haliscomenobacter hydrossis complexed with 3-aminooxypropionic acid
    27% identity, 90% coverage of query (74.7 bits)

6fteB / A0A0D2C5V9 Crystal structure of an (r)-selective amine transaminase from exophiala xenobiotica
    27% identity, 92% coverage of query (71.6 bits)

ilvE / O27481 branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.42) from Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (see 3 papers)
    26% identity, 93% coverage of query (70.1 bits)

Q5DQ95 aminodeoxychorismate lyase (EC 4.1.3.38) from Solanum lycopersicum (see 2 papers)
    29% identity, 83% coverage of query (68.6 bits)

6xwbA Crystal structure of an r-selective transaminase from thermomyces stellatus. (see paper)
    25% identity, 92% coverage of query (68.2 bits)

pabC / P28821 4-amino-4-deoxychorismate pyruvate-lyase (EC 4.1.3.38) from Bacillus subtilis (strain 168) (see paper)
PABC_BACSU / P28821 Aminodeoxychorismate lyase; 4-amino-4-deoxychorismate lyase; ADC lyase; ADCL; EC 4.1.3.38 from Bacillus subtilis (strain 168) (see paper)
    25% identity, 88% coverage of query (66.2 bits)

F2L0W0 branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermoproteus uzoniensis (see 3 papers)
    26% identity, 90% coverage of query (65.5 bits)

4ce5A / Q0C8G1 First crystal structure of an (r)-selective omega-transaminase from aspergillus terreus (see paper)
    25% identity, 92% coverage of query (65.5 bits)

P54691 branched-chain-amino-acid transaminase (EC 2.6.1.42); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Synechocystis sp. (see paper)
    27% identity, 84% coverage of query (65.5 bits)

6thqB / F2L0W0 Crystal structure of branched-chain aminotransferase from thermophilic archaea thermoproteus uzoniensis with norvaline
    26% identity, 90% coverage of query (65.5 bits)

4ce5B First crystal structure of an (r)-selective omega-transaminase from aspergillus terreus
    25% identity, 92% coverage of query (65.5 bits)

6xu3C (R)-selective amine transaminase from shinella sp. (see paper)
    24% identity, 87% coverage of query (65.1 bits)

6xu3A (R)-selective amine transaminase from shinella sp.
    24% identity, 87% coverage of query (65.1 bits)

6xu3B (R)-selective amine transaminase from shinella sp.
    24% identity, 87% coverage of query (64.7 bits)

7p3tB / B8KQT8 Transaminase of gamma-proteobacterium (see paper)
    29% identity, 87% coverage of query (63.9 bits)

7dbeB Structure of a novel transaminase
    25% identity, 90% coverage of query (62.4 bits)

4cmdA / C7YVL8 The (r)-selective transaminase from nectria haematococca (see paper)
    26% identity, 87% coverage of query (62.4 bits)

4cmfA The (r)-selective transaminase from nectria haematococca with inhibitor bound
    26% identity, 87% coverage of query (62.4 bits)

1i1lA / P0AB80 Crystal structure of eschelichia coli branched-chain amino acid aminotransferase. (see paper)
    26% identity, 93% coverage of query (58.9 bits)

IlvE / b3770 branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
ilvE / P0AB80 branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli (strain K12) (see paper)
ilvE / RF|YP_026247 branched-chain-amino-acid aminotransferase; EC 2.6.1.42 from Escherichia coli K12 (see 11 papers)
    26% identity, 93% coverage of query (58.9 bits)

4chiA / Q4WH08 (R)-selective amine transaminase from aspergillus fumigatus at 1.27 a resolution (see paper)
    22% identity, 93% coverage of query (58.9 bits)

1iyeA Crystal structure of eschelichia coli branched-chain amino acid aminotransferase
    26% identity, 93% coverage of query (58.9 bits)

1iydA Crystal structure of eschelichia coli branched-chain amino acid aminotransferase
    26% identity, 93% coverage of query (58.9 bits)

1i1mA Crystal structure of escherichia coli branched-chain amino acid aminotransferase.
    26% identity, 93% coverage of query (58.9 bits)

4uugA The (r)-selective amine transaminase from aspergillus fumigatus with inhibitor bound
    22% identity, 93% coverage of query (58.9 bits)

7z79B / T1XIY1 Crystal structure of aminotransferase-like protein from variovorax paradoxus
    25% identity, 98% coverage of query (56.2 bits)

6snlD / A0A0D1XFW6 (R)-selective amine transaminase from exophiala sideris (see paper)
    23% identity, 92% coverage of query (55.1 bits)

2y4rA / Q9HZN6 Crystal structure of 4-amino-4-deoxychorismate lyase from pseudomonas aeruginosa (see paper)
    29% identity, 86% coverage of query (54.3 bits)

Q9HZN6 aminodeoxychorismate lyase (EC 4.1.3.38) from Pseudomonas aeruginosa (see paper)
    29% identity, 86% coverage of query (54.3 bits)

A0A558JDR6 D-amino-acid transaminase (EC 2.6.1.21) from Halomonas titanicae (see paper)
    28% identity, 92% coverage of query (53.5 bits)

8onjA / D5EHC5 Crystal structure of d-amino acid aminotransferase from aminobacterium colombiense point mutant r88l (see paper)
    25% identity, 89% coverage of query (52.4 bits)

6h65C / D0LR31 Crystal structure of the branched-chain-amino-acid aminotransferase from haliangium ochraceum
    28% identity, 92% coverage of query (52.0 bits)

D0LR31 branched-chain-amino-acid transaminase (EC 2.6.1.42) from Haliangium ochraceum (see paper)
    28% identity, 92% coverage of query (52.0 bits)

ilvE / O86428 branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 4 papers)
O86428 branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa (see paper)
    26% identity, 93% coverage of query (51.6 bits)

pabC-1 / Q6W5R4 4-amino-4-deoxychorismate lyase (EC 4.1.3.38) from Streptomyces sp. FR-008 (see 2 papers)
    28% identity, 98% coverage of query (51.2 bits)

3wwhA / F7J696 Crystal structure of the first r-stereoselective -transaminase identified from arthrobacter sp. Knk168 (ferm-bp-5228) (see paper)
    24% identity, 92% coverage of query (50.8 bits)

Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas stutzeri RCH2
    27% identity, 91% coverage of query (47.8 bits)

pabB para-aminobenzoate synthase, component I from Ralstonia solanacearum (see paper)
    30% identity, 75% coverage of query (47.0 bits)

Q5SKM2 aminodeoxychorismate lyase (EC 4.1.3.38) from Thermus thermophilus (see paper)
2zgiD / Q5SKM2 Crystal structure of putative 4-amino-4-deoxychorismate lyase (see paper)
    26% identity, 76% coverage of query (44.3 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory