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Searching for up to 100 curated homologs for WP_092350543.1 NCBI__GCF_900107645.1:WP_092350543.1 (317 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 2.A.80.1.1 / Q9FA46 TctC aka STM2786, component of The tricarboxylate transporter, TctABC from Salmonella enterica (see paper)
    47% identity, 98% coverage of query (309 bits)

HP15_2661 Citrate uptake transporter, substrate-binding component TctC from Marinobacter adhaerens HP15
    37% identity, 93% coverage of query (189 bits)

Build an alignment

Build an alignment for WP_092350543.1 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

TC 2.A.80.1.4 / S5XTE7 Citrate uptake transporter, substrate binding protein, component of Pmf-dependent citrate uptake porter, TctABC from Corynebacterium glutamicum MB001
    29% identity, 97% coverage of query (117 bits)

Dshi_3123 Tricarboxylate transport protein TctC from Dinoroseobacter shibae DFL-12
    27% identity, 88% coverage of query (105 bits)

7ndrD Crystal structure of tphc in an open conformation
    18% identity, 79% coverage of query (45.4 bits)

7ndsA / A0A5N7XFM8 Crystal structure of tphc in a closed conformation (see paper)
    18% identity, 79% coverage of query (45.4 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory