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Searching for up to 100 curated homologs for WP_093392840.1 NCBI__GCF_900114975.1:WP_093392840.1 (143 a.a.)

Found high-coverage hits (≥70%) to 10 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Q729F0 NAD(P)H dehydrogenase (quinone) (subunit 1/3) (EC 1.6.5.2) from Desulfovibrio vulgaris (see paper)
    56% identity, 88% coverage of query (166 bits)

VHCD_METVO / Q00405 F420-non-reducing hydrogenase vhc iron-sulfur subunit D; EC 1.12.99.- from Methanococcus voltae (see paper)
    52% identity, 91% coverage of query (165 bits)

VHCD_ARCPA / P84624 F420-non-reducing hydrogenase iron-sulfur subunit D; EC 1.12.99.- from Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) (see paper)
    53% identity, 91% coverage of query (163 bits)

5odcD / A0A2D0TC98 Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus at 2.3 a resolution (see paper)
    52% identity, 92% coverage of query (160 bits)

MVHD_METTM / P60238 F420-non-reducing hydrogenase iron-sulfur subunit D; Methyl viologen-reducing hydrogenase subunit delta; MVH subunit D; EC 1.12.99.- from Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg) (Methanobacterium thermoautotrophicum) (see 2 papers)
    51% identity, 92% coverage of query (155 bits)

7bkbF / Q2FKZ0 Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) (see paper)
    48% identity, 91% coverage of query (152 bits)

hdrA2 / Q8TM02 HdrA2 (EC 1.8.7.3; EC 1.8.98.4) from Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) (see 2 papers)
HDRA2_METAC / Q8TM02 Ferredoxin/F(420)H(2)-dependent CoB-CoM heterodisulfide reductase subunit A; Coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase subunit A; Ferredoxin:CoB-CoM heterodisulfide reductase subunit A; EC 1.8.7.3; EC 1.8.98.4 from Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) (see 2 papers)
    46% identity, 96% coverage of query (149 bits)

mvhD / Q2RJ82 MvhD from Moorella thermoacetica (strain ATCC 39073 / JCM 9320) (see paper)
    41% identity, 100% coverage of query (134 bits)

Q6LWL3 coenzyme F420 hydrogenase (EC 1.12.98.1) from Methanococcus maripaludis (see paper)
    41% identity, 89% coverage of query (117 bits)

qmoB / Q7X166 QmoB from Desulfovibrio desulfuricans (see 4 papers)
    30% identity, 88% coverage of query (74.3 bits)

Build an alignment

Build an alignment for WP_093392840.1 and 10 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory