Sites on a Tree

 

Searching for up to 100 curated homologs for WP_095508745.1 NCBI__GCF_002283365.1:WP_095508745.1 (93 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Sama_1522 small component of lactate uptake system from Shewanella amazonensis SB2B
    46% identity, 82% coverage of query (73.9 bits)

Shew_2372 small component of L-lactate and L-malate uptake system from Shewanella loihica PV-4
    42% identity, 84% coverage of query (70.9 bits)

HP15_1252 small component of pyruvate transporter (TIGR03647) from Marinobacter adhaerens HP15
    45% identity, 84% coverage of query (66.2 bits)

Psest_0346 small component of pyruvate/D-alanine transporter (TIGR03647) from Pseudomonas stutzeri RCH2
    43% identity, 82% coverage of query (65.5 bits)

Build an alignment

Build an alignment for WP_095508745.1 and 4 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory