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Searching for up to 100 curated homologs for WP_109939208.1 NCBI__GCF_003173335.1:WP_109939208.1 (196 a.a.)

Found high-coverage hits (≥70%) to 10 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

SatP / b0010 acetate/succinate:H+ symporter from Escherichia coli K-12 substr. MG1655 (see 6 papers)
satP / P0AC98 acetate/succinate:H+ symporter from Escherichia coli (strain K12) (see 5 papers)
SATP_ECOLI / P0AC98 Succinate-acetate/proton symporter SatP; Succinate-acetate transporter protein from Escherichia coli (strain K12) (see 2 papers)
TC 2.A.96.1.1 / P0AC98 Acetate/succinate transporter, SatP or YaaH from Escherichia coli (strain K12) (see 5 papers)
    47% identity, 91% coverage of query (160 bits)

5ys3A / A8ALU5 1.8 angstrom crystal structure of succinate-acetate permease from citrobacter koseri (see paper)
    47% identity, 91% coverage of query (158 bits)

5ys8A 2.8 angstrom crystal structure of succinate-acetate permease from citrobacter koseri
    47% identity, 91% coverage of query (158 bits)

ATO2_YEAST / P32907 Ammonia transport outward protein 2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 3 papers)
TC 2.A.96.1.7 / P32907 Ammonia transport outward protein 2, ATO2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (see 9 papers)
    38% identity, 84% coverage of query (92.0 bits)

ADY2_YEAST / P25613 Accumulation of dyads protein 2; Ammonia transport outward protein 1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 6 papers)
TC 2.A.96.1.4 / P25613 The acetate permease, Ady2, required for normal sporulation; phosphorylated in mitochondria from Saccharomyces cerevisiae (see 10 papers)
    37% identity, 91% coverage of query (89.4 bits)

MUG86_SCHPO / O14201 Meiotically up-regulated gene 86 protein from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see 2 papers)
    33% identity, 90% coverage of query (81.6 bits)

FRP3 possible transmembrane sensor/transporter from Candida albicans (see paper)
    34% identity, 87% coverage of query (75.9 bits)

GPR1_YARLI / P41943 Glyoxylate pathway regulator from Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica) (see paper)
TC 2.A.96.1.2 / P41943 Gpr1/YarL1 glyoxylate pathway regulator from Yarrowia lipolytica (Candida lipolytica) (see 3 papers)
    32% identity, 81% coverage of query (70.5 bits)

Build an alignment

Build an alignment for WP_109939208.1 and 8 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

PATA_ASPCL / A1CFK8 Acetate transporter protein patA; Patulin synthesis protein A from Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) (see 3 papers)
    27% identity, 82% coverage of query (45.4 bits)

PATA_PENEN / A0A075TRL0 Acetate transporter protein patA; Patulin biosynthesis cluster protein A from Penicillium expansum (Blue mold rot fungus) (see 8 papers)
    26% identity, 90% coverage of query (45.1 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory