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Searching for up to 100 curated homologs for WP_110804622.1 NCBI__GCF_003217355.1:WP_110804622.1 (304 a.a.)

Found high-coverage hits (≥70%) to 28 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PY2CR_PARDP / A1B196 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Paracoccus denitrificans (strain Pd 1222) (see paper)
    48% identity, 95% coverage of query (259 bits)

YK01_SCHPO / Q9HDZ0 Uncharacterized protein P11E10.01 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    31% identity, 94% coverage of query (144 bits)

SARD4_ARATH / Q9FLY0 Protein SAR DEFICIENT 4; Ornithine cyclodeaminase-like protein; AtOCD from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
    31% identity, 81% coverage of query (143 bits)

PY2CR_COLP3 / Q485R8 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus) (see 2 papers)
Q485R8 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] (EC 1.5.1.1) from Colwellia psychrerythraea (see paper)
    32% identity, 79% coverage of query (126 bits)

O54983 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Mus musculus (see paper)
    30% identity, 80% coverage of query (124 bits)

PY2CR_BACCZ / Q63FA5 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Bacillus cereus (strain ZK / E33L) (see paper)
    31% identity, 86% coverage of query (122 bits)

Q9QYU4 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Rattus norvegicus (see paper)
    30% identity, 80% coverage of query (122 bits)

F1RPC8 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Sus scrofa (see paper)
    30% identity, 75% coverage of query (121 bits)

PY2CR_BACC1 / Q73CR9 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Bacillus cereus (strain ATCC 10987 / NRS 248) (see paper)
    30% identity, 86% coverage of query (120 bits)

4bv9A Crystal structure of the NADPH form of mouse mu-crystallin.
    31% identity, 75% coverage of query (120 bits)

4bvaA Crystal structure of the NADPH-t3 form of mouse mu-crystallin.
    31% identity, 74% coverage of query (117 bits)

CRYM / Q14894 ketimine reductase monomer (EC 1.5.1.1; EC 1.5.1.25) from Homo sapiens (see 9 papers)
CRYM_HUMAN / Q14894 Ketimine reductase mu-crystallin; NADP-regulated thyroid-hormone-binding protein; EC 1.5.1.25 from Homo sapiens (Human) (see 3 papers)
Q14894 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21); thiomorpholine-carboxylate dehydrogenase (EC 1.5.1.25) from Homo sapiens (see 2 papers)
    30% identity, 75% coverage of query (116 bits)

2i99A / Q14894 Crystal structure of human mu_crystallin at 2.6 angstrom (see paper)
    30% identity, 75% coverage of query (115 bits)

Build an alignment

Build an alignment for WP_110804622.1 and 13 homologs with ≥ 30% identity

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Change minimum %identity:

Additional hits (identity < 30%)

W5PYW4 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Ovis aries (see paper)
    29% identity, 75% coverage of query (115 bits)

PY2CR_BACCR / Q81HB0 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) (see paper)
    30% identity, 86% coverage of query (114 bits)

PY2CR_BACHK / Q6HMS8 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Bacillus thuringiensis subsp. konkukian (strain 97-27) (see paper)
    29% identity, 85% coverage of query (113 bits)

6t3eB / H3ZMH3 Structure of thermococcus litoralis delta(1)-pyrroline-2-carboxylate reductase in complex with nadh and l-proline (see paper)
    27% identity, 93% coverage of query (107 bits)

1omoA / O28608 Alanine dehydrogenase dimer w/bound NAD (archaeal) (see paper)
    29% identity, 78% coverage of query (96.7 bits)

ALADH_ARCFU / O28608 Alanine dehydrogenase; AlaDH; EC 1.4.1.1 from Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) (see 2 papers)
O28608 alanine dehydrogenase (EC 1.4.1.1) from Archaeoglobus fulgidus (see paper)
    29% identity, 78% coverage of query (96.3 bits)

PYCR1_BURM1 / A9AKH1 Delta(1)-pyrroline-2-carboxylate reductase 1; Pyr2C reductase 1; Proline ketimine reductase 1; EC 1.5.1.49 from Burkholderia multivorans (strain ATCC 17616 / 249) (see paper)
    32% identity, 80% coverage of query (72.4 bits)

PYCR2_BURCM / Q0B953 Delta(1)-pyrroline-2-carboxylate reductase 2; Pyr2C reductase 2; Proline ketimine reductase 2; EC 1.5.1.49 from Burkholderia ambifaria (strain ATCC BAA-244 / DSM 16087 / CCUG 44356 / LMG 19182 / AMMD) (Burkholderia cepacia (strain AMMD)) (see paper)
    32% identity, 80% coverage of query (60.5 bits)

4mp6A / A0A0H3K9Y6 Staphyloferrin b precursor biosynthetic enzyme sbnb bound to citrate and NAD+ (see paper)
    24% identity, 73% coverage of query (59.3 bits)

sbnB / Q2G1N2 N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase monomer (EC 1.5.1.51) from Staphylococcus aureus (strain NCTC 8325 / PS 47) (see 2 papers)
SBNB_STAA8 / Q2G1N2 N-((2S)-2-amino-2-carboxyethyl)-L-glutamate dehydrogenase; Staphyloferrin B biosynthesis protein SbnB; EC 1.5.1.51 from Staphylococcus aureus (strain NCTC 8325 / PS 47) (see 3 papers)
A0A0H3K9Y6 N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase (EC 1.5.1.51) from Staphylococcus aureus (see 2 papers)
    24% identity, 73% coverage of query (59.3 bits)

4mpdA Staphyloferrin b precursor biosynthetic enzyme sbnb bound a- ketoglutarate and NAD+
    24% identity, 73% coverage of query (58.5 bits)

lhpI / V5YW53 Δ1-pyrroline-2-carboxylate reductase subunit (EC 1.5.1.49) from Azospirillum brasilense (see paper)
PY2CR_AZOBR / V5YW53 Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase; Pyr2C/Pip2C reductase; EC 1.5.1.1 from Azospirillum brasilense (see paper)
V5YW53 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] (EC 1.5.1.1) from Azospirillum brasilense (see paper)
    30% identity, 70% coverage of query (57.8 bits)

4m54A / A0A0H3K9Y6 The structure of the staphyloferrin b precursor biosynthetic enzyme sbnb bound to n-(1-amino-1-carboxyl-2-ethyl)-glutamic acid and nadh (see paper)
    24% identity, 73% coverage of query (54.3 bits)

arcB / P09773 ornithine cyclodeaminase (EC 4.3.1.12) from Agrobacterium fabrum (strain C58 / ATCC 33970) (see 5 papers)
OCD_AGRFC / P09773 Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see paper)
    24% identity, 77% coverage of query (47.4 bits)

B1GT63 Strombine dehydrogenase (EC 1.5.1.22) from Suberites domuncula (see paper)
    21% identity, 79% coverage of query (46.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory