Sites on a Tree

 

Searching for up to 100 curated homologs for WP_111391465.1 NCBI__GCF_003253485.1:WP_111391465.1 (801 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

FADN_BACSU / O32178 Probable 3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35 from Bacillus subtilis (strain 168) (see paper)
    48% identity, 100% coverage of query (706 bits)

Q0KEG0 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator (see paper)
    39% identity, 100% coverage of query (497 bits)

corN / D7RK19 (3S,5E,8E)-3-hydroxy-5-methyldeca-5,8-dienoyl-[CorL PKS] dehydratase from Corallococcus coralloides (see 2 papers)
    30% identity, 100% coverage of query (348 bits)

Build an alignment

Build an alignment for WP_111391465.1 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory