# Candidate

orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: 4-hydroxybenzoate
stepId: hcl
locusId: GFF5116
desc: Long-chain-fatty-acid--CoA ligase
curatedIds: SwissProt::Q8GQN9,BRENDA::Q8GQN9,metacyc::MONOMER-3061
otherIds:
CharProtDB::CH_000804,SwissProt::P69451,TCDB::P69451,ecocyc::ACYLCOASYN-MONOMER,metacyc::ACYLCOASYN-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: 4-hydroxybenzoate
stepId: pta
locusId: GFF343
desc: NADP-dependent malic enzyme
curatedIds: BRENDA::C1DER7
otherIds:
BRENDA::P76558,CharProtDB::CH_003278,SwissProt::P76558,ecocyc::MALIC-NADP-MONOMER,metacyc::MALIC-NADP-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: NAG
stepId: nagB
locusId: GFF4792
desc: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
curatedIds: reanno::Korea:Ga0059261_1644
otherIds:
BRENDA::P17169,CharProtDB::CH_003876,SwissProt::P17169,ecocyc::L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER,metacyc::L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: cellobiose
stepId: eda
locusId: GFF139
desc: KHG/KDPG aldolase
otherIds: SwissProt::Q92RN8
curatedIds:
BRENDA::P0A955,CharProtDB::CH_088603,SwissProt::P0A955,ecocyc::KDPGALDOL-4OH2OXOGLUTARALDOL-MONOMER,metacyc::KDPGALDOL-4OH2OXOGLUTARALDOL-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: cellobiose
stepId: eda
locusId: GFF123
desc: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
otherIds: SwissProt::Q92RN8
curatedIds:
SwissProt::Q6BF16,BRENDA::Q6BF16,CharProtDB::CH_024651,ecocyc::DEHYDDEOXPHOSGALACT-ALDOL-MONOMER,metacyc::DEHYDDEOXPHOSGALACT-ALDOL-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: cellobiose
stepId: edd
locusId: GFF121
desc: L-arabonate dehydratase
otherIds: reanno::BFirm:BPHYT_RS19730
curatedIds:
CharProtDB::CH_024239,SwissProt::P0ADF6,ecocyc::PGLUCONDEHYDRAT-MONOMER,metacyc::PGLUCONDEHYDRAT-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: cellobiose
stepId: gdh
locusId: GFF1079
desc: Quinoprotein glucose dehydrogenase
otherIds: metacyc::MONOMER-28
curatedIds:
CharProtDB::CH_002195,CharProtDB::CH_024760,SwissProt::P15877,ecocyc::GLUCDEHYDROG-MONOMER,metacyc::GLUCDEHYDROG-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: cellobiose
stepId: kguD
locusId: GFF4673
desc: D-3-phosphoglycerate dehydrogenase
curatedIds: reanno::BFirm:BPHYT_RS11290
otherIds:
BRENDA::P0A9T0,CharProtDB::CH_088336,SwissProt::P0A9T0,ecocyc::PGLYCDEHYDROG-MONOMER,metacyc::PGLYCDEHYDROG-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: cellobiose
stepId: pgmA
locusId: GFF2055
desc: Phosphoglucosamine mutase
curatedIds: metacyc::MONOMER-13382
otherIds:
CharProtDB::CH_003592,SwissProt::P31120,ecocyc::PHOSGLUCOSAMINEMUT-MONOMER,metacyc::PHOSGLUCOSAMINEMUT-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: fructose
stepId: tpi
locusId: GFF5667
desc: Triosephosphate isomerase
hmmId: TIGR00419
hmmDesc: tpiA: triose-phosphate isomerase (EC 5.3.1.1)
curatedIds:
BRENDA::P0A858,CharProtDB::CH_024675,SwissProt::B1XB85,SwissProt::P0A858,ecocyc::TPI-MONOMER,metacyc::TPI-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: galactose
stepId: dgoD
locusId: GFF5397
desc: L-rhamnonate dehydratase
otherIds: metacyc::MONOMER-18707
curatedIds:
CharProtDB::CH_024133,SwissProt::Q6BF17,ecocyc::GALACTONATE-DEHYDRATASE-MONOMER,metacyc::GALACTONATE-DEHYDRATASE-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: glucosamine
stepId: glucosaminate-lyase
locusId: GFF2323
desc: Glucosaminate ammonia-lyase
curatedIds: curated2:Q93HX6
otherIds:
CharProtDB::CH_024124,SwissProt::P0A9P4,ecocyc::THIOREDOXIN-REDUCT-NADPH-MONOMER,metacyc::THIOREDOXIN-REDUCT-NADPH-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: glutamate
stepId: glmS
locusId: GFF617
desc: Methionine synthase
curatedIds: SwissProt::P80078,BRENDA::P80078
otherIds:
BRENDA::P13009,CharProtDB::CH_090726,SwissProt::P13009,ecocyc::HOMOCYSMETB12-MONOMER,metacyc::HOMOCYSMETB12-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: isoleucine
stepId: prpB
locusId: GFF3983
desc: Isocitrate lyase
curatedIds:
BRENDA::P9WKK7,SwissProt::H8EVV4,SwissProt::P0A5H4,SwissProt::P9WKK6,SwissProt::P9WKK7,metacyc::G185E-4594-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: maltose
stepId: malK
locusId: GFF4695
desc: Maltose/maltodextrin import ATP-binding protein MalK
otherIds: reanno::acidovorax_3H11:Ac3H11_2941
curatedIds:
BRENDA::P68187,CharProtDB::CH_024750,SwissProt::P68187,TCDB::P68187,ecocyc::MALK-MONOMER,metacyc::MALK-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: threonine
stepId: gloA
locusId: GFF135
desc: Lactoylglutathione lyase
hmmId: TIGR00068
hmmDesc: gloA: lactoylglutathione lyase (EC 4.4.1.5)
curatedIds:
BRENDA::P0AC81,CharProtDB::CH_014266,SwissProt::P0AC81,ecocyc::GLYOXI-MONOMER,metacyc::GLYOXI-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: threonine
stepId: gloB
locusId: GFF5447
desc: S-formylglutathione hydrolase
otherIds: SwissProt::Q9GJT2
curatedIds:
BRENDA::P33018,CharProtDB::CH_024314,SwissProt::P33018,ecocyc::EG12026-MONOMER,metacyc::EG12026-MONOMER


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: tryptophan
stepId: antC
locusId: GFF2184
curatedIds: reanno::WCS417:GFF4631
otherIds: BRENDA::P95561
desc:
Ferredoxin--NAD(P)(+) reductase (naphthalene dioxygenase/salicylate 5-hydroxylase ferredoxin-specific)


# RuleScore

orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: deoxyribose
ruleId: all
path: deoxyribose-dehyd deoxyribonate-transport deoxyribonate-degradation
path2: deoxyribose-transport deoK deoC acetaldehyde-degradation
expandedPath:
drdehyd-alpha drdehyd-beta drdehyd-cytc deoxyribonate-transport deoxyribonate-dehyd ketodeoxyribonate-cleavage garK atoA atoD atoB


orgId: FitnessBrowser__Variovorax_OAS795
pathwayId: valine
ruleId: all
path: valine-transport BKD acdH ech bch mmsB mmsA propionyl-CoA-degradation
expandedPath:
livF livG livJ livH livM bkdA bkdB bkdC lpd acdH ech bch mmsB mmsA pccA pccB epi mcm-large mcm-small


