# Candidate

orgId: NCBI__GCA_900104855.1
pathwayId: 4-hydroxybenzoate
stepId: bamI
locusId: SED91790.1
sysName: SAMN05519104_4742
curatedIds: uniprot:Q39TW6
otherIds: metacyc::MONOMER-4201,BRENDA::Q8KTI7
desc:
NAD-dependent formate dehydrogenase catalytic subunit /NAD-dependent formate dehydrogenase iron-sulfur protein


orgId: NCBI__GCA_900104855.1
pathwayId: 4-hydroxybenzoate
stepId: pta
locusId: SED18539.1
sysName: SAMN05519104_2983
desc: allosteric NADP-dependent malic enzyme
curatedIds: metacyc::PTACLOS-MONOMER
otherIds:
BRENDA::P76558,CharProtDB::CH_003278,SwissProt::P76558,ecocyc::MALIC-NADP-MONOMER,metacyc::MALIC-NADP-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: D-alanine
stepId: AZOBR_RS08240
locusId: SEF01188.1
sysName: SAMN05519104_7728
curatedIds: uniprot:G8ALI9
otherIds: TCDB::P21628
desc:
amino acid/amide ABC transporter membrane protein 2, HAAT family /amino acid/amide ABC transporter ATP-binding protein 1, HAAT family


orgId: NCBI__GCA_900104855.1
pathwayId: NAG
stepId: nagB
locusId: SEE43871.1
sysName: SAMN05519104_6114
desc: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
curatedIds: reanno::Korea:Ga0059261_1644
otherIds:
BRENDA::P17169,CharProtDB::CH_003876,SwissProt::P17169,ecocyc::L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER,metacyc::L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: alanine
stepId: braF
locusId: SED83270.1
sysName: SAMN05519104_4493
curatedIds: TCDB::Q7A2H0
otherIds: TCDB::Q8VM83
desc:
branched-chain amino acid transport system ATP-binding protein/neutral amino acid transport system ATP-binding protein


orgId: NCBI__GCA_900104855.1
pathwayId: arabinose
stepId: xylGsa
locusId: SEE46538.1
sysName: SAMN05519104_6199
curatedIds: uniprot:P0DTT6
otherIds: SwissProt::Q9F9B0,TCDB::Q9F9B0
desc:
mannose ABC transporter ATP-binding protein /fructose ABC transporter ATP-binding protein /ribose ABC transporter ATP-binding protein


orgId: NCBI__GCA_900104855.1
pathwayId: asparagine
stepId: aatP
locusId: SEC10166.1
sysName: SAMN05519104_0754
curatedIds: TCDB::P0AAG3,ecocyc::GLTL-MONOMER,metacyc::GLTL-MONOMER
otherIds: SwissProt::O34677
desc:
polar amino acid transport system ATP-binding protein/glutamate/aspartate transport system ATP-binding protein


orgId: NCBI__GCA_900104855.1
pathwayId: asparagine
stepId: ans
locusId: SEF03132.1
sysName: SAMN05519104_7936
desc: asparagine synthase (glutamine-hydrolysing)
otherIds: metacyc::MONOMER-15525
curatedIds:
BRENDA::P22106,CharProtDB::CH_002444,SwissProt::P22106,ecocyc::ASNSYNB-MONOMER,metacyc::ASNSYNB-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: cellobiose
stepId: eda
locusId: SEC52012.1
sysName: SAMN05519104_1536
desc: 2-keto-3-deoxy-phosphogluconate aldolase
curatedIds:
BRENDA::P0A955,CharProtDB::CH_088603,SwissProt::P0A955,ecocyc::KDPGALDOL-4OH2OXOGLUTARALDOL-MONOMER,metacyc::KDPGALDOL-4OH2OXOGLUTARALDOL-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: cellobiose
stepId: eda
locusId: SEC43796.1
sysName: SAMN05519104_1381
desc: 2-dehydro-3-deoxyphosphogalactonate aldolase
otherIds: SwissProt::Q92RN8
curatedIds:
SwissProt::Q6BF16,BRENDA::Q6BF16,CharProtDB::CH_024651,ecocyc::DEHYDDEOXPHOSGALACT-ALDOL-MONOMER,metacyc::DEHYDDEOXPHOSGALACT-ALDOL-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: cellobiose
stepId: edd
locusId: SED17204.1
sysName: SAMN05519104_2953
desc: dihydroxyacid dehydratase
otherIds: SwissProt::P0DOV7
curatedIds:
CharProtDB::CH_024239,SwissProt::P0ADF6,ecocyc::PGLUCONDEHYDRAT-MONOMER,metacyc::PGLUCONDEHYDRAT-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: cellobiose
stepId: pgmA
locusId: SED47817.1
sysName: SAMN05519104_3629
desc: phosphoglucosamine mutase
curatedIds: metacyc::MONOMER-13382
otherIds:
CharProtDB::CH_003592,SwissProt::P31120,ecocyc::PHOSGLUCOSAMINEMUT-MONOMER,metacyc::PHOSGLUCOSAMINEMUT-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: citrate
stepId: fecE
locusId: SEE69257.1
sysName: SAMN05519104_7083
curatedIds: CharProtDB::CH_088321,SwissProt::P15031,TCDB::P15031,ecocyc::FECE-MONOMER,metacyc::FECE-MONOMER
otherIds: TCDB::P31134,ecocyc::POTG-MONOMER,metacyc::POTG-MONOMER
desc:
putative spermidine/putrescine transport system ATP-binding protein/putrescine transport system ATP-binding protein


orgId: NCBI__GCA_900104855.1
pathwayId: galactose
stepId: dgoD
locusId: SED52777.1
sysName: SAMN05519104_3739
desc: L-alanine-DL-glutamate epimerase
otherIds: metacyc::MONOMER-18070
curatedIds:
CharProtDB::CH_024133,SwissProt::Q6BF17,ecocyc::GALACTONATE-DEHYDRATASE-MONOMER,metacyc::GALACTONATE-DEHYDRATASE-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: glucosamine
stepId: glucosaminate-lyase
locusId: SEC15388.1
sysName: SAMN05519104_0856
desc: thioredoxin reductase (NADPH)
curatedIds: curated2:Q93HX6
otherIds:
CharProtDB::CH_024124,SwissProt::P0A9P4,ecocyc::THIOREDOXIN-REDUCT-NADPH-MONOMER,metacyc::THIOREDOXIN-REDUCT-NADPH-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: isoleucine
stepId: ech
locusId: SED10372.1
sysName: SAMN05519104_2802
desc: short chain enoyl-CoA hydratase
curatedIds: SwissProt::G4V4T7
otherIds:
BRENDA::P31551,CharProtDB::CH_000803,SwissProt::P31551,ecocyc::CARNRACE-MONOMER,metacyc::CARNRACE-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: isoleucine
stepId: prpB
locusId: SED04843.1
sysName: SAMN05519104_2674
desc: isocitrate lyase
curatedIds:
BRENDA::P9WKK7,SwissProt::H8EVV4,SwissProt::P0A5H4,SwissProt::P9WKK6,SwissProt::P9WKK7,metacyc::G185E-4594-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: mannose
stepId: HSERO_RS03635
locusId: SEF05744.1
sysName: SAMN05519104_8099
curatedIds: uniprot:D8IZC6
desc:
ribose transport system substrate-binding protein/inositol transport system substrate-binding protein


orgId: NCBI__GCA_900104855.1
pathwayId: mannose
stepId: TM1749
locusId: SED94135.1
sysName: SAMN05519104_4801
curatedIds: TCDB::Q9X271
otherIds: TCDB::B1W1L9
desc:
peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein


orgId: NCBI__GCA_900104855.1
pathwayId: phenylacetate
stepId: paaK
locusId: SED07317.1
sysName: SAMN05519104_2732
desc: long-chain acyl-CoA synthetase
curatedIds: BRENDA::A7KUK6
otherIds:
CharProtDB::CH_000804,SwissProt::P69451,TCDB::P69451,ecocyc::ACYLCOASYN-MONOMER,metacyc::ACYLCOASYN-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: putrescine
stepId: potB
locusId: SEF02462.1
sysName: SAMN05519104_7864
curatedIds: CharProtDB::CH_088338,TCDB::P31135,ecocyc::POTH-MONOMER,metacyc::POTH-MONOMER
otherIds: TCDB::Q1M7Q3
desc:
putative spermidine/putrescine transport system permease protein/mannopine transport system permease protein


orgId: NCBI__GCA_900104855.1
pathwayId: threonine
stepId: kbl
locusId: SEE01086.1
sysName: SAMN05519104_4981
desc: 2-amino-3-ketobutyrate coenzyme A ligase
hmmId: TIGR01822
hmmDesc: kbl: glycine C-acetyltransferase (EC 2.3.1.29)
curatedIds:
BRENDA::P0AB77,CharProtDB::CH_088327,SwissProt::P0AB77,ecocyc::AKBLIG-MONOMER,metacyc::AKBLIG-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: trehalose
stepId: treF
locusId: SED55803.1
sysName: SAMN05519104_3807
desc: alpha,alpha-trehalase
curatedIds:
BRENDA::P13482,CAZy::AAC74281.1,SwissProt::P13482,ecocyc::TREHALAPERI-MONOMER,metacyc::TREHALAPERI-MONOMER


orgId: NCBI__GCA_900104855.1
pathwayId: tryptophan
stepId: hpaH
locusId: SEB91072.1
sysName: SAMN05519104_0368
curatedIds: SwissProt::A4IT51,metacyc::MONOMER-15633
otherIds: BRENDA::Q5SJP8,SwissProt::Q5SJP8
desc:
4-hydroxyphenylacetate 3-monooxygenase/anthranilate 3-monooxygenase (FAD) / 4-hydroxyphenylacetate 3-monooxygenase


# RuleScore

orgId: NCBI__GCA_900104855.1
pathwayId: deoxyribose
ruleId: all
path: deoxyribose-dehyd deoxyribonate-transport deoxyribonate-degradation
path2: deoxyribose-transport deoK deoC acetaldehyde-degradation
expandedPath:
drdehyd-alpha drdehyd-beta drdehyd-cytc deoxyribonate-transport deoxyribonate-dehyd ketodeoxyribonate-cleavage garK atoA atoD atoB


orgId: NCBI__GCA_900104855.1
pathwayId: galactose
ruleId: galactose-utilization
path: galactose-transport galactose-degradation
path2: galactose-PTS galactose-6-phosphate-degradation
expandedPath:
PfGW456L13_1894 PfGW456L13_1895 PfGW456L13_1896 PfGW456L13_1897 galdh galactonolactonase dgoD dgoK dgoA


orgId: NCBI__GCA_900104855.1
pathwayId: valine
ruleId: all
path: valine-transport BKD acdH ech bch mmsB mmsA propionyl-CoA-degradation
expandedPath:
livF livG livJ livH livM bkdA bkdB bkdC lpd acdH ech bch mmsB mmsA pccA pccB epi mcm-large mcm-small


