# Candidate

orgId: NCBI__GCF_000620085.1
pathwayId: 4-hydroxybenzoate
stepId: adh
locusId: WP_027858594.1
sysName: Q354_RS0116710
desc: succinylglutamate-semialdehyde dehydrogenase
otherIds: reanno::MR1:199807
curatedIds:
BRENDA::P76217,CharProtDB::CH_002939,SwissProt::P76217,ecocyc::SUCCGLUALDDEHYD-MONOMER,metacyc::SUCCGLUALDDEHYD-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: D-lactate
stepId: D-LDH
locusId: WP_027856753.1
sysName: Q354_RS0105615
desc: phosphoglycerate dehydrogenase
curatedIds: BRENDA::A0A0M3KL04
otherIds:
BRENDA::P0A9T0,CharProtDB::CH_088336,SwissProt::P0A9T0,ecocyc::PGLYCDEHYDROG-MONOMER,metacyc::PGLYCDEHYDROG-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: NAG
stepId: nagB
locusId: WP_027858489.1
sysName: Q354_RS0116070
desc: glutamine--fructose-6-phosphate transaminase (isomerizing)
curatedIds: reanno::Phaeo:GFF2746
otherIds:
BRENDA::P17169,CharProtDB::CH_003876,SwissProt::P17169,ecocyc::L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER,metacyc::L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: arabinose
stepId: xacD
locusId: WP_027858044.1
sysName: Q354_RS0113365
desc: dihydroxy-acid dehydratase
curatedIds: SwissProt::B5ZZ34,BRENDA::I9XDU6
otherIds:
CharProtDB::CH_024768,SwissProt::P05791,ecocyc::DIHYDROXYACIDDEHYDRAT-MONOMER,metacyc::DIHYDROXYACIDDEHYDRAT-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: arginine
stepId: gabD
locusId: WP_027856325.1
sysName: Q354_RS0102975
desc: NAD-dependent succinate-semialdehyde dehydrogenase
curatedIds:
BRENDA::P25526,CharProtDB::CH_003374,SwissProt::P25526,ecocyc::SUCCSEMIALDDEHYDROG-MONOMER,metacyc::SUCCSEMIALDDEHYDROG-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: cellobiose
stepId: pgmA
locusId: WP_027858304.1
sysName: Q354_RS0114885
desc: phosphoglucosamine mutase
curatedIds: SwissProt::Q68BJ6
otherIds:
CharProtDB::CH_003592,SwissProt::P31120,ecocyc::PHOSGLUCOSAMINEMUT-MONOMER,metacyc::PHOSGLUCOSAMINEMUT-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: citrate
stepId: acn
locusId: WP_027859089.1
sysName: Q354_RS0119610
desc: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
hmmId: TIGR00117
hmmDesc: acnB: aconitate hydratase 2 (EC 4.2.1.3)
curatedIds:
BRENDA::P36683,CharProtDB::CH_002191,SwissProt::P36683,ecocyc::ACONITATEDEHYDRB-MONOMER,metacyc::ACONITATEDEHYDRB-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: fructose
stepId: tpi
locusId: WP_027858305.1
sysName: Q354_RS0114890
desc: triose-phosphate isomerase
hmmId: TIGR00419
hmmDesc: tpiA: triose-phosphate isomerase (EC 5.3.1.1)
curatedIds:
BRENDA::P0A858,CharProtDB::CH_024675,SwissProt::B1XB85,SwissProt::P0A858,ecocyc::TPI-MONOMER,metacyc::TPI-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: galactose
stepId: dgoD
locusId: WP_027857353.1
sysName: Q354_RS0109220
desc: mandelate racemase/muconate lactonizing enzyme family protein
otherIds: reanno::Smeli:SM_b21107
curatedIds:
CharProtDB::CH_024133,SwissProt::Q6BF17,ecocyc::GALACTONATE-DEHYDRATASE-MONOMER,metacyc::GALACTONATE-DEHYDRATASE-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: galactose
stepId: lacC
locusId: WP_027859452.1
sysName: Q354_RS0121735
desc: 6-phosphofructokinase
otherIds: BRENDA::P21777,SwissProt::P21777
curatedIds:
CharProtDB::CH_024070,SwissProt::P0A796,ecocyc::6PFK-1-MONOMER,metacyc::6PFK-1-MONOMER,metacyc::MONOMER-18281


orgId: NCBI__GCF_000620085.1
pathwayId: glucosamine
stepId: glucosaminate-lyase
locusId: WP_027859809.1
sysName: Q354_RS0123805
desc: thioredoxin-disulfide reductase
curatedIds: curated2:Q93HX6
otherIds:
CharProtDB::CH_024124,SwissProt::P0A9P4,ecocyc::THIOREDOXIN-REDUCT-NADPH-MONOMER,metacyc::THIOREDOXIN-REDUCT-NADPH-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: isoleucine
stepId: mcm-small
locusId: WP_027859614.1
sysName: Q354_RS0122655
desc: methionine synthase
curatedIds: BRENDA::A4YIE3
otherIds:
BRENDA::P13009,CharProtDB::CH_090726,SwissProt::P13009,ecocyc::HOMOCYSMETB12-MONOMER,metacyc::HOMOCYSMETB12-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: phenylalanine
stepId: ARO8
locusId: WP_027857664.1
sysName: Q354_RS0111100
desc: pyridoxal phosphate-dependent aminotransferase
curatedIds: curated2:P63499
otherIds:
BRENDA::D2AFZ3,BRENDA::P0A959,CharProtDB::CH_024885,SwissProt::P0A959,ecocyc::G7184-MONOMER,metacyc::G7184-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: sucrose
stepId: galU
locusId: WP_027857795.1
sysName: Q354_RS0111920
desc: UTP--glucose-1-phosphate uridylyltransferase GalU
hmmId: TIGR01099
hmmDesc: galU: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)
otherIds: ecocyc::G7093-MONOMER
curatedIds:
CharProtDB::CH_021667,SwissProt::P0AEP6,ecocyc::GLUC1PURIDYLTRANS-MONOMER,metacyc::GLUC1PURIDYLTRANS-MONOMER


orgId: NCBI__GCF_000620085.1
pathwayId: threonine
stepId: gloB
locusId: WP_027858945.1
sysName: Q354_RS0118745
desc: S-formylglutathione hydrolase
otherIds: BRENDA::Q3IL66
curatedIds:
BRENDA::P33018,CharProtDB::CH_024314,SwissProt::P33018,ecocyc::EG12026-MONOMER,metacyc::EG12026-MONOMER


# RuleScore

orgId: NCBI__GCF_000620085.1
pathwayId: deoxyribose
ruleId: all
path: deoxyribose-dehyd deoxyribonate-transport deoxyribonate-degradation
path2: deoxyribose-transport deoK deoC acetaldehyde-degradation
expandedPath:
drdehyd-alpha drdehyd-beta drdehyd-cytc deoxyribonate-transport deoxyribonate-dehyd ketodeoxyribonate-cleavage garK atoA atoD atoB


orgId: NCBI__GCF_000620085.1
pathwayId: phenylalanine
ruleId: all
path: phenylalanine-transport ARO8 phenylpyruvate-decarboxylase pad-dh phenylacetate-degradation
path2: phenylalanine-transport ARO8 phenylpyruvate-fd-oxidoreductase phenylacetyl-CoA-degradation
expandedPath:
livF livG livH livM livJ ARO8 ARO10 pad-dh paaK paaA paaB paaC paaE paaG paaZ1 paaZ2 paaJ1 paaF paaH paaJ2


