# Candidate

orgId: NCBI__GCF_007830735.1
pathwayId: 4-hydroxybenzoate
stepId: oah
locusId: WP_145024297.1
sysName: JN12_RS15300
desc: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase
curatedIds: SwissProt::Q39TV7
otherIds:
CharProtDB::CH_013797,SwissProt::P0ABU0,ecocyc::NAPHTHOATE-SYN-MONOMER,metacyc::NAPHTHOATE-SYN-MONOMER


orgId: NCBI__GCF_007830735.1
pathwayId: 4-hydroxybenzoate
stepId: pta
locusId: WP_145023362.1
sysName: JN12_RS12900
desc: NADP-dependent malic enzyme
curatedIds: curated2:Q59330
otherIds:
BRENDA::P76558,CharProtDB::CH_003278,SwissProt::P76558,ecocyc::MALIC-NADP-MONOMER,metacyc::MALIC-NADP-MONOMER


orgId: NCBI__GCF_007830735.1
pathwayId: NAG
stepId: nagB
locusId: WP_145024757.1
sysName: JN12_RS16480
desc: glutamine--fructose-6-phosphate transaminase (isomerizing)
curatedIds: reanno::Korea:Ga0059261_1644
otherIds:
BRENDA::P17169,CharProtDB::CH_003876,SwissProt::P17169,ecocyc::L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER,metacyc::L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER


orgId: NCBI__GCF_007830735.1
pathwayId: arginine
stepId: gabD
locusId: WP_145017955.1
sysName: JN12_RS03000
desc: NADP-dependent succinate-semialdehyde dehydrogenase
curatedIds:
BRENDA::P25526,CharProtDB::CH_003374,SwissProt::P25526,ecocyc::SUCCSEMIALDDEHYDROG-MONOMER,metacyc::SUCCSEMIALDDEHYDROG-MONOMER


orgId: NCBI__GCF_007830735.1
pathwayId: galactose
stepId: lacC
locusId: WP_145019575.1
sysName: JN12_RS05790
desc: 6-phosphofructokinase
otherIds: SwissProt::P00512,BRENDA::P00512
curatedIds:
CharProtDB::CH_024070,SwissProt::P0A796,ecocyc::6PFK-1-MONOMER,metacyc::6PFK-1-MONOMER,metacyc::MONOMER-18281


orgId: NCBI__GCF_007830735.1
pathwayId: glucosamine
stepId: glucosaminate-lyase
locusId: WP_145017110.1
sysName: JN12_RS00825
desc: thioredoxin-disulfide reductase
curatedIds: curated2:Q93HX6
otherIds:
CharProtDB::CH_024124,SwissProt::P0A9P4,ecocyc::THIOREDOXIN-REDUCT-NADPH-MONOMER,metacyc::THIOREDOXIN-REDUCT-NADPH-MONOMER


orgId: NCBI__GCF_007830735.1
pathwayId: glutamate
stepId: fumD
locusId: WP_145018035.1
sysName: JN12_RS03170
desc: fumarate hydratase
curatedIds:
BRENDA::P14407,CharProtDB::CH_004085,CharProtDB::CH_024650,SwissProt::P14407,ecocyc::FUMB-MONOMER,metacyc::FUMB-MONOMER


orgId: NCBI__GCF_007830735.1
pathwayId: phenylalanine
stepId: ARO8
locusId: WP_145024831.1
sysName: JN12_RS16690
desc: branched-chain amino acid aminotransferase
otherIds: SwissProt::P39576
curatedIds:
BRENDA::P0AB80,CharProtDB::CH_024500,ecocyc::BRANCHED-CHAINAMINOTRANSFER-MONOMER,metacyc::BRANCHED-CHAINAMINOTRANSFER-MONOMER


# RuleScore

orgId: NCBI__GCF_007830735.1
pathwayId: phenylacetate
ruleId: phenylacetyl-CoA-degradation
path: phenylacetyl-CoA-dehydrogenase phenylglyoxylate-dehydrogenase benzoyl-CoA-degradation
path2: paaA paaB paaC paaE paaG paaZ1 paaZ2 paaJ1 paaF paaH paaJ2
expandedPath:
padB padC padD padG padI padE padF padH bamB bamC bamD bamE bamF bamG bamH bamI dch had oah pimB gcdH ech fadB atoB


orgId: NCBI__GCF_007830735.1
pathwayId: phenylacetate
ruleId: phenylacetate-degradation
path: paaK phenylacetyl-CoA-degradation
expandedPath:
paaK padB padC padD padG padI padE padF padH bamB bamC bamD bamE bamF bamG bamH bamI dch had oah pimB gcdH ech fadB atoB


orgId: NCBI__GCF_007830735.1
pathwayId: phenylacetate
ruleId: all
path: phenylacetate-transport phenylacetate-degradation
expandedPath:
ppa paaK padB padC padD padG padI padE padF padH bamB bamC bamD bamE bamF bamG bamH bamI dch had oah pimB gcdH ech fadB atoB


orgId: NCBI__GCF_007830735.1
pathwayId: phenylalanine
ruleId: all
path: phenylalanine-transport ARO8 phenylpyruvate-fd-oxidoreductase phenylacetyl-CoA-degradation
path2: phenylalanine-transport ARO8 phenylpyruvate-decarboxylase pad-dh phenylacetate-degradation
expandedPath:
livF livG livH livM livJ ARO8 iorA iorB padB padC padD padG padI padE padF padH bamB bamC bamD bamE bamF bamG bamH bamI dch had oah pimB gcdH ech fadB atoB


orgId: NCBI__GCF_007830735.1
pathwayId: valine
ruleId: all
path: valine-transport BKD acdH ech bch mmsB mmsA propionyl-CoA-degradation
expandedPath:
livF livG livJ livH livM bkdA bkdB bkdC lpd acdH ech bch mmsB mmsA pccA pccB epi mcm-large mcm-small


