Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT0532: anthranilate synthase component I (NCBI ptt file)
is similar to:
PaperBLAST

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

36% id,
99% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

36% id,
94% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

36% id,
94% cov

More...

BT0767: putative para-aminobenzoate synthase component I (NCBI ptt file)
is similar to:
PaperBLAST

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

30% id,
72% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

29% id,
60% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

29% id,
55% cov

More...

BT4700: isochorismate synthase entC (NCBI ptt file)
is similar to:
PaperBLAST

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

22% id,
69% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

24% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory