Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)
Found 5 curated entries in PaperBLAST's database that match '1.1.1.122' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query
| Echvi_1691: Predicted dehydrogenases and related proteins is similar to: | PaperBLAST |
SM_b21109: L-fucose dehydrogenase (EC 1.1.1.122) from Sinorhizobium meliloti | 43% id, 91% cov |
| Echvi_3219: Zn-dependent alcohol dehydrogenases is similar to: | PaperBLAST |
Q97YM2: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Saccharolobus solfataricus | 30% id, 97% cov |
| Echvi_0509: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) is similar to: | PaperBLAST |
FCDH_PSESP / Q52472: D-threo-aldose 1-dehydrogenase; L-fucose dehydrogenase; EC 1.1.1.122 from Pseudomonas sp. | 27% id, 96% cov |
| Echvi_3375: Predicted dehydrogenases and related proteins is similar to: | PaperBLAST |
SM_b21109: L-fucose dehydrogenase (EC 1.1.1.122) from Sinorhizobium meliloti | 24% id, 91% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3981635-3982834 (frame -2) on Echvi_Contig97.1 is similar to: | PaperBLAST |
SM_b21109: L-fucose dehydrogenase (EC 1.1.1.122) from Sinorhizobium meliloti | 24% id, 94% cov |
Lawrence Berkeley National Laboratory