Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_0515: L-ribulokinase
is similar to:
PaperBLAST

Echvi_0515: Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis

100% id,
100% cov

CA265_RS08625: Ribulokinase (EC 2.7.1.16) from Pedobacter sp.

56% id,
97% cov

ARAB_ECOLI / P08204: Ribulokinase; EC 2.7.1.16 from Escherichia coli
AraB / b0063: ribulokinase (EC 2.7.1.16) from Escherichia coli
araB: ribulokinase; EC 2.7.1.16 from Escherichia coli
araB / P08204: ribulokinase (EC 2.7.1.16) from Escherichia coli

49% id,
98% cov

More...

Echvi_4514: Ribulose kinase
is similar to:
PaperBLAST

Echvi_0515: Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis

52% id,
98% cov

CA265_RS08625: Ribulokinase (EC 2.7.1.16) from Pedobacter sp.

47% id,
98% cov

ARAB_ECOLI / P08204: Ribulokinase; EC 2.7.1.16 from Escherichia coli
AraB / b0063: ribulokinase (EC 2.7.1.16) from Escherichia coli
araB: ribulokinase; EC 2.7.1.16 from Escherichia coli
araB / P08204: ribulokinase (EC 2.7.1.16) from Escherichia coli

42% id,
98% cov

More...

Echvi_1279: Glycerol kinase
is similar to:
PaperBLAST

Echvi_0515: Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis

22% id,
50% cov

CA265_RS08625: Ribulokinase (EC 2.7.1.16) from Pedobacter sp.

21% id,
42% cov

Echvi_1770: glycerol kinase
is similar to:
PaperBLAST

ARAB_BACSU / P94524: Ribulokinase; EC 2.7.1.16 from Bacillus subtilis

27% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory