Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 68 curated entries in PaperBLAST's database that match '4.2.1.10' as complete word(s).
These curated entries have 50 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1551: 3-dehydroquinate dehydratase, type II (RefSeq) is similar to: | PaperBLAST |
G8M0G7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Acetivibrio clariflavus | 57% id, 95% cov |
O30557: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Pseudomonas aeruginosa | 55% id, 96% cov |
qsuC / A4QB64: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Corynebacterium glutamicum | 54% id, 96% cov |
| Dshi_3450: shikimate 5-dehydrogenase (RefSeq) is similar to: | PaperBLAST |
A0A5H2WZU5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis | 38% id, 49% cov |
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 36% id, 46% cov |
| Dshi_1608: 3-dehydroquinate synthase (RefSeq) is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 33% id, 23% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 41% id, 12% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 30% id, 9% cov |
| Dshi_2865: succinate dehydrogenase, flavoprotein subunit (RefSeq) is similar to: | PaperBLAST |
A0A5H2X4C4: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis | 28% id, 18% cov |
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana | 28% id, 16% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3631951-3632856 (frame -3) on 57145 is similar to: | PaperBLAST |
A0A5H2WZU5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis | 36% id, 56% cov |
Lawrence Berkeley National Laboratory