Searching in Shewanella oneidensis MR-1 (MR1)
Found 11 curated entries in PaperBLAST's database that match '2.3.1.174' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO0020: fatty oxidation complex, beta subunit (NCBI ptt file) is similar to: | PaperBLAST |
H281DRAFT_05723: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Paraburkholderia bryophila | 47% id, 100% cov |
HSERO_RS20660: bifunctional thiolase PaaJ: 3-oxo-5,6-dehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Herbaspirillum seropedicae | 46% id, 100% cov |
BPHYT_RS17345: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Burkholderia phytofirmans | 46% id, 100% cov |
| SO1677: acetyl-CoA acetyltransferase (NCBI ptt file) is similar to: | PaperBLAST |
PCAF_PSEKB / Q8VPF1: Beta-ketoadipyl-CoA thiolase; 3-oxoadipyl-CoA thiolase; EC 2.3.1.174 from Pseudomonas knackmussii | 40% id, 100% cov |
pcaF / Q0K4S3: 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Cupriavidus necator | 40% id, 99% cov |
Tfu_0875 / Q47RK4: 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Thermobifida fusca | 39% id, 99% cov |
| SO3089: fatty oxidation complex, beta subunit (NCBI ptt file) is similar to: | PaperBLAST |
Tfu_0875 / Q47RK4: 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Thermobifida fusca | 34% id, 99% cov |
pcaF / Q0K4S3: 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Cupriavidus necator | 32% id, 98% cov |
PAAJ_ECOLI / P0C7L2: 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; EC 2.3.1.174; EC 2.3.1.223 from Escherichia coli | 31% id, 98% cov |
| SO2774: 3-oxoacyl-(acyl-carrier-protein) synthase II (NCBI ptt file) is similar to: | PaperBLAST |
H281DRAFT_05723: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Paraburkholderia bryophila | 25% id, 51% cov |
PCAF_PSEKB / Q8VPF1: Beta-ketoadipyl-CoA thiolase; 3-oxoadipyl-CoA thiolase; EC 2.3.1.174 from Pseudomonas knackmussii | 23% id, 53% cov |
paaJ / Q845J8: β-ketoadipyl-CoA thiolase (EC 2.3.1.174; EC 2.3.1.223) from Pseudomonas sp. | 27% id, 33% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory