Searching in Desulfovibrio vulgaris Miyazaki F (Miya)
Found 19 curated entries in PaperBLAST's database that match '1.1.99.6' as complete word(s).
These curated entries have 18 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query
DvMF_1567: D-lactate dehydrogenase (cytochrome) (RefSeq) is similar to: | PaperBLAST |
DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus | 39% id, 96% cov |
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix | 36% id, 94% cov |
SMc00832: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Sinorhizobium meliloti | 34% id, 96% cov |
DvMF_1862: FAD linked oxidase domain protein (RefSeq) is similar to: | PaperBLAST |
Psest_3841: D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri | 39% id, 92% cov |
E6N788: (S)-2-hydroxy-acid oxidase (EC 1.1.3.15); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Candidatus Caldarchaeum | 35% id, 98% cov |
G4RPF4: D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Thermoproteus tenax | 35% id, 95% cov |
DvMF_2875: FAD linked oxidase domain protein (RefSeq) is similar to: | PaperBLAST |
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix | 34% id, 98% cov |
E6N788: (S)-2-hydroxy-acid oxidase (EC 1.1.3.15); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Candidatus Caldarchaeum | 34% id, 95% cov |
SMc00832: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Sinorhizobium meliloti | 34% id, 94% cov |
DvMF_2874: 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) is similar to: | PaperBLAST |
SMc00926: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Sinorhizobium meliloti | 28% id, 84% cov |
PGA1_c29700: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Phaeobacter inhibens | 27% id, 78% cov |
DvMF_1863: protein of unknown function DUF224 cysteine-rich region domain protein (RefSeq) is similar to: | PaperBLAST |
Psest_3839: D-lactate/glycolate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri | 24% id, 100% cov |
PGA1_c29700: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Phaeobacter inhibens | 24% id, 90% cov |
DvMF_2353: FAD linked oxidase domain protein (RefSeq) is similar to: | PaperBLAST |
SMc00832: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Sinorhizobium meliloti | 26% id, 80% cov |
DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus | 30% id, 63% cov |
PGA1_c29720: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Phaeobacter inhibens | 26% id, 62% cov |
DvMF_2196: FAD linked oxidase domain protein (RefSeq) is similar to: | PaperBLAST |
G4RPF4: D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Thermoproteus tenax | 26% id, 69% cov |
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix | 29% id, 60% cov |
DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus | 27% id, 60% cov |
DvMF_0397: protein of unknown function DUF224 cysteine-rich region domain protein (RefSeq) is similar to: | PaperBLAST |
SMc00926: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Sinorhizobium meliloti | 30% id, 51% cov |
RR42_RS17315: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Cupriavidus basilensis | 26% id, 57% cov |
Psest_3839: D-lactate/glycolate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri | 26% id, 57% cov |
DvMF_0262: 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) is similar to: | PaperBLAST |
PGA1_c29700: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Phaeobacter inhibens | 33% id, 17% cov |
RR42_RS17315: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Cupriavidus basilensis | 33% id, 16% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
467885-468799 (frame -3) on 254340 is similar to: | PaperBLAST |
RR42_RS17315: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Cupriavidus basilensis | 25% id, 73% cov |
Lawrence Berkeley National Laboratory