Searching in Azospirillum brasilense Sp245 (azobra)
Found 7 curated entries in PaperBLAST's database that match '4.2.1.68' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Azospirillum brasilense Sp245, or try another query
| AZOBR_RS31430: galactarate dehydratase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 37% id, 91% cov |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 41% id, 74% cov |
| AZOBR_RS16155: altronate hydrolase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 29% id, 91% cov |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 34% id, 72% cov |
| AZOBR_RS04900: dehydratase is similar to: | PaperBLAST |
ENOF1_HUMAN / Q7L5Y1: Mitochondrial enolase superfamily member 1; Antisense RNA to thymidylate synthase; rTS; L-fuconate dehydratase; EC 4.2.1.68 from Homo sapiens | 23% id, 90% cov |
FUCD_XANCP / Q8P3K2: L-fuconate dehydratase; FucD; EC 4.2.1.68 from Xanthomonas campestris | 27% id, 55% cov |
| AZOBR_RS26635: mandelate racemase is similar to: | PaperBLAST |
ENOF1_HUMAN / Q7L5Y1: Mitochondrial enolase superfamily member 1; Antisense RNA to thymidylate synthase; rTS; L-fuconate dehydratase; EC 4.2.1.68 from Homo sapiens | 23% id, 75% cov |
HSERO_RS05235: L-fuconate dehydratase (EC 4.2.1.68) from Herbaspirillum seropedicae | 29% id, 53% cov |
G3Y683: L-fuconate dehydratase (EC 4.2.1.68) from Aspergillus niger | 27% id, 46% cov |
| AZOBR_RS25270: mandelate racemase is similar to: | PaperBLAST |
FUCD_XANCP / Q8P3K2: L-fuconate dehydratase; FucD; EC 4.2.1.68 from Xanthomonas campestris | 27% id, 52% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 371304-372839 (frame +3) on NC_016594.1 is similar to: | PaperBLAST |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 34% id, 80% cov |
Lawrence Berkeley National Laboratory