Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS07490: anthranilate synthase subunit I
is similar to:
PaperBLAST

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

62% id,
97% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

46% id,
97% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

46% id,
94% cov

More...

AZOBR_RS06415: anthranilate synthase subunit I
is similar to:
PaperBLAST

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

32% id,
91% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

36% id,
79% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

35% id,
75% cov

More...

AZOBR_RS29550: isochorismate synthase dhbC
is similar to:
PaperBLAST

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

32% id,
64% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

31% id,
58% cov

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

29% id,
61% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory