Curated BLAST
Searching in Desulfovibrio vulgaris Hildenborough (882)
Found 21 curated entries in PaperBLAST's database that match '1.17.1.8' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query
DVU1609: dihydrodipicolinate reductase is similar to: | PaperBLAST |
DvMF_0450: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Desulfovibrio vulgaris | 76% id, 100% cov |
Q9K1F1: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Neisseria meningitidis | 40% id, 98% cov |
DAPB_ECOLI / P04036: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Escherichia coli DapB / b0031: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Escherichia coli dapB / P04036: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Escherichia coli | 41% id, 96% cov |
Q2YJN7: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Brucella abortus | 39% id, 98% cov |
Q6G2G3: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Bartonella henselae | 38% id, 98% cov |
DAPB_THEMA / Q9X1K8: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Thermotoga maritima | 33% id, 96% cov |
Q5HG24: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Staphylococcus aureus | 31% id, 99% cov |
dapB / P40110: dihydropicolinate reductase subunit (EC 1.17.1.8) from Corynebacterium glutamicum P40110: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Corynebacterium glutamicum | 29% id, 98% cov |
Echvi_2395: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Echinicola vietnamensis | 30% id, 95% cov |
DAPB_MYCTU / P9WP23: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Mycobacterium tuberculosis dapB / P9WP23: dihydropicolinate reductase subunit (EC 1.17.1.8) from Mycobacterium tuberculosis P9WP23: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Mycobacterium tuberculosis | 30% id, 93% cov |
dapB / P42976: dihydrodipicolinate reductase subunit (EC 1.17.1.8) from Bacillus subtilis | 28% id, 89% cov |
CA265_RS15670: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Pedobacter sp. | 31% id, 80% cov |
More... |
DVU1868: dihydrodipicolinate synthase is similar to: | PaperBLAST |
Q3M723: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Trichormus variabilis | 45% id, 89% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory