Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)

Found 14 curated entries in PaperBLAST's database that match '1.2.1.41' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query

RSPH17029_RS17760 Rsph17029_3516 WP_011842417.1: glutamate-5-semialdehyde dehydrogenase
is similar to:
PaperBLAST

PROA_ECOLI / P07004: Gamma-glutamyl phosphate reductase; GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase; EC 1.2.1.41 from Escherichia coli
ProA / b0243: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Escherichia coli
proA / P07004: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Escherichia coli

44% id,
100% cov

A7Y114: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Halobacillus halophilus

44% id,
97% cov

PROA_YEAST / P54885: Gamma-glutamyl phosphate reductase; GPR; Glutamate-5-semialdehyde dehydrogenase; GSA dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; EC 1.2.1.41 from Saccharomyces cerevisiae

39% id,
94% cov

More...

proB RSPH17029_RS17755 Rsph17029_3515 WP_011338952.1: glutamate 5-kinase
is similar to:
PaperBLAST

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

34% id,
45% cov

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

35% id,
38% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa
Q941T1: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Oryza sativa

31% id,
36% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory