Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)

Found 23 curated entries in PaperBLAST's database that match '2.6.1.9' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query

hisC RSPH17029_RS04895 Rsph17029_0959 WP_009564739.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

 73% id,
98% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

 51% id,
97% cov

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

 44% id,
98% cov

More...

RSPH17029_RS03545 Rsph17029_0694 WP_011840543.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

Psest_3297: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri

 33% id,
99% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

 32% id,
100% cov

HP15_2427: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Marinobacter adhaerens

 32% id,
98% cov

More...

RSPH17029_RS12225 Rsph17029_2422 WP_002720951.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

 25% id,
95% cov

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

 24% id,
77% cov

cobD RSPH17029_RS12340 Rsph17029_2445 WP_011841670.1: threonine-phosphate decarboxylase CobD
is similar to:		 PaperBLAST

DvMF_0908: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris

 31% id,
68% cov

HIS8_ECOLI / P06986: Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; HPAT; HspAT; EC 2.6.1.9 from Escherichia coli
HisC / b2021: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli
hisC / P06986: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli

 29% id,
70% cov

DVU1029: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris

 28% id,
72% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory