Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)

Found 25 curated entries in PaperBLAST's database that match '2.7.2.8' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query

argB RSPH17029_RS13770 Rsph17029_2729 WP_002721433.1: acetylglutamate kinase
is similar to:
PaperBLAST

ARGB_PSEAE / Q9HTN2: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Pseudomonas aeruginosa
Q9HTN2: acetylglutamate kinase (EC 2.7.2.8) from Pseudomonas aeruginosa

49% id,
99% cov

ARGB_THEMA / Q9X2A4: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Thermotoga maritima
Q9X2A4: acetylglutamate kinase (EC 2.7.2.8) from Thermotoga maritima

48% id,
99% cov

Q6V1L5: acetylglutamate kinase (EC 2.7.2.8) from Synechococcus elongatus

50% id,
91% cov

More...

proB RSPH17029_RS17755 Rsph17029_3515 WP_011338952.1: glutamate 5-kinase
is similar to:
PaperBLAST

ARGB_MYCTU / P9WQ01: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Mycobacterium tuberculosis

31% id,
38% cov

argC RSPH17029_RS08060 Rsph17029_1592 WP_011841120.1: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae
Q01217: acetylglutamate kinase (EC 2.7.2.8) from Saccharomyces cerevisiae

28% id,
36% cov

RSPH17029_RS02525 Rsph17029_0498 WP_011337028.1: aspartate kinase
is similar to:
PaperBLAST

Q59281: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium glutamicum

33% id,
28% cov

Q6R6P5: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium crenatum

33% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory