Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)

Found 22 curated entries in PaperBLAST's database that match 'argininosuccinate lyase' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query

argH RSPH17029_RS12015 Rsph17029_2381 WP_011841626.1: argininosuccinate lyase
is similar to:
PaperBLAST

2e9fB / Q5SLL0: Crystal structure of t.Th.Hb8 argininosuccinate lyase complexed with l-arginine

54% id,
100% cov

argH / BAC65282.1: argininosuccinate lyase from Burkholderia multivorans

53% id,
97% cov

ArgH / b3960: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli
argH / P11447: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli

47% id,
99% cov

More...

RSPH17029_RS09120 Rsph17029_1803 WP_011841245.1: sodium:solute symporter
is similar to:
PaperBLAST

argH / CAA88927.2: argininosuccinate lyase from Streptomyces clavuligerus

50% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory