Curated BLAST for Genomes

 

Curated BLAST

Searching in Agathobacter rectalis ATCC 33656 (GCF_000020605.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.86' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Agathobacter rectalis ATCC 33656, or try another query

ilvC EUBREC_RS09020 EUBREC_2000 WP_012742838.1: ketol-acid reductoisomerase
is similar to:
PaperBLAST

Q9Z565: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces coelicolor
D6ERQ9: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces lividans

60% id,
100% cov

D6EC76: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces lividans

60% id,
100% cov

Q9FBT8: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces coelicolor

60% id,
100% cov

More...

EUBREC_RS07200 EUBREC_1612 WP_041254014.1: helix-hairpin-helix domain-containing protein
is similar to:
PaperBLAST

E0SRA9: ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Ignisphaera aggregans

27% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory