Curated BLAST for Genomes

 

Curated BLAST

Searching in Agathobacter rectalis ATCC 33656 (GCF_000020605.1)

Found 6 curated entries in PaperBLAST's database that match 'acetohydroxy-acid synthase%large' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Agathobacter rectalis ATCC 33656, or try another query

ilvB EUBREC_RS08455 EUBREC_1876 WP_012742717.1: biosynthetic-type acetolactate synthase large subunit
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

44% id,
100% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

46% id,
91% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

42% id,
95% cov

More...

ilvB EUBREC_RS05570 EUBREC_1250 WP_012742109.1: biosynthetic-type acetolactate synthase large subunit
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

42% id,
100% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

44% id,
95% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

44% id,
91% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory