Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichormus variabilis ATCC 29413 (GCF_000204075.1)

Found 39 curated entries in PaperBLAST's database that match '2.4.2.17' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Trichormus variabilis ATCC 29413, or try another query

hisG AVA_RS22075 Ava_4346 WP_011321024.1: ATP phosphoribosyltransferase
is similar to:
PaperBLAST

HSERO_RS20350: ATP phosphoribosyltransferase (EC 2.4.2.17) from Herbaspirillum seropedicae

38% id,
97% cov

Ga0059261_1280: ATP phosphoribosyltransferase (EC 2.4.2.17) from Sphingomonas koreensis

37% id,
96% cov

Pf6N2E2_3253: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens

36% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory