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Family Search for PF01930 (Cas_Cas4)

PF01930.17 hits 54 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

CAS4_HALVD / D4GQN9 CRISPR-associated exonuclease Cas4; EC 3.1.12.1 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
Aligns to 26:183 / 183 (86.3%), covers 99.4% of PF01930, 145.3 bits

CS4F1_MYXXD / Q1CW50 CRISPR-associated exonuclease Cas4/endonuclease Cas1 fusion; EC 3.1.-.-; EC 3.1.12.1 from Myxococcus xanthus (strain DK 1622) (see paper)
Aligns to 33:209 / 568 (31.2%), covers 98.1% of PF01930, 71.3 bits

CAS4_FRATN / A0Q5Y6 CRISPR-associated exonuclease Cas4; EC 3.1.12.1 from Francisella tularensis subsp. novicida (strain U112) (see paper)
Aligns to 13:195 / 196 (93.4%), covers 96.9% of PF01930, 58.1 bits

CAS4_THETK / G4RJY5 CRISPR-associated exonuclease Cas4; EC 3.1.12.1 from Thermoproteus tenax (strain ATCC 35583 / DSM 2078 / JCM 9277 / NBRC 100435 / Kra 1) (see paper)
Aligns to 6:182 / 190 (93.2%), covers 97.5% of PF01930, 58.1 bits

CAS4_PYRCJ / A3MTK6 CRISPR-associated exonuclease Cas4; EC 3.1.12.1 from Pyrobaculum calidifontis (strain JCM 11548 / VA1) (see 2 papers)
Aligns to 54:211 / 213 (74.2%), covers 96.9% of PF01930, 57.1 bits

CAS4_SACS2 / Q97TX9 CRISPR-associated exonuclease Cas4; EC 3.1.12.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 2 papers)
Q97TX9 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming) (EC 3.1.12.1) from Sulfolobus solfataricus (see 2 papers)
Aligns to 22:199 / 202 (88.1%), covers 96.9% of PF01930, 33.6 bits

DNA2_SCHPO / Q9URU2 DNA replication ATP-dependent helicase/nuclease dna2; EC 3.1.-.-; EC 3.6.4.12 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see 5 papers)
Aligns to 536:690 / 1397 (11.1%), covers 58.6% of PF01930, 26.1 bits

dna2 / RF|NP_596499.1 DNA replication endonuclease-helicase Dna2 from Schizosaccharomyces pombe (see 4 papers)
Aligns to 537:691 / 1398 (11.1%), covers 58.6% of PF01930, 26.1 bits

Or search for genetic data about PF01930 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory