PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF04285 (DUF444)

PF04285.12 hits 20 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

YeaH / b1784 DUF444 domain-containing protein YeaH from Escherichia coli K-12 substr. MG1655 (see 3 papers)
b1784 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) from Escherichia coli BW25113
Aligns to 3:421 / 427 (98.1%), covers 99.8% of PF04285, 619.7 bits

Sama_1922 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) from Shewanella amazonensis SB2B
Aligns to 3:421 / 423 (99.1%), covers 99.8% of PF04285, 616.1 bits

SO2883 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) from Shewanella oneidensis MR-1
Aligns to 3:420 / 422 (99.1%), covers 99.8% of PF04285, 614.2 bits

Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) from Pseudomonas fluorescens FW300-N2E2
Aligns to 3:420 / 423 (98.8%), covers 99.5% of PF04285, 599.4 bits

AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) from Pseudomonas fluorescens FW300-N2C3
Aligns to 3:420 / 423 (98.8%), covers 99.5% of PF04285, 598.0 bits

AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) from Pseudomonas fluorescens FW300-N2E3
Aligns to 3:420 / 423 (98.8%), covers 99.5% of PF04285, 593.0 bits

YHBH_BACSU / P45742 Stress response UPF0229 protein YhbH from Bacillus subtilis (strain 168) (see paper)
2 alignments in 10:383 / 392 (95.4%), covering up to 45.8% of PF04285, 342.7 bits

Or search for genetic data about PF04285 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory