PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05728 (UPF0227)

PF05728.12 hits 28 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

YzzI / b3031 esterase YqiA from Escherichia coli K-12 substr. MG1655 (see 4 papers)
YQIA_ECOLI / P0A8Z7 Esterase YqiA; EC 3.1.-.- from Escherichia coli (strain K12) (see paper)
P0A8Z7 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) from Escherichia coli (see paper)
Aligns to 3:189 / 193 (96.9%), covers 98.9% of PF05728, 249.7 bits

YcfP / b1108 UPF0227 protein YcfP from Escherichia coli K-12 substr. MG1655 (see 3 papers)
Aligns to 1:178 / 180 (98.9%), covers 99.5% of PF05728, 241.4 bits

Pf6N2E2_3637 yqiA-like hydrolase, affects the cell envelope from Pseudomonas fluorescens FW300-N2E2
Aligns to 4:188 / 202 (91.6%), covers 99.5% of PF05728, 209.1 bits

Psest_0482 yqiA-like hydrolase, affects the cell envelope from Pseudomonas stutzeri RCH2
Aligns to 7:191 / 201 (92.0%), covers 99.5% of PF05728, 205.7 bits

SO3900 yqiA-like hydrolase, affects the cell envelope from Shewanella oneidensis MR-1
Aligns to 1:189 / 191 (99.0%), covers 99.5% of PF05728, 196.4 bits

Shew_0548 yqiA-like hydrolase, affects the cell envelope from Shewanella loihica PV-4
Aligns to 1:189 / 192 (98.4%), covers 99.5% of PF05728, 181.8 bits

Sama_3044 yqiA-like hydrolase, affects the cell envelope from Shewanella amazonensis SB2B
Aligns to 1:189 / 191 (99.0%), covers 99.5% of PF05728, 171.0 bits

Or search for genetic data about PF05728 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory