PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF11879 (DUF3399)

PF11879.8 hits 19 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

KCND3_HUMAN / Q9UK17 Potassium voltage-gated channel subfamily D member 3; Voltage-gated potassium channel subunit Kv4.3 from Homo sapiens (Human) (see 12 papers)
Aligns to 442:563 / 655 (18.6%), covers 99.0% of PF11879, 146.5 bits

KCND3_RAT / Q62897 Potassium voltage-gated channel subfamily D member 3; Voltage-gated potassium channel subunit Kv4.3 from Rattus norvegicus (Rat) (see 7 papers)
Aligns to 442:563 / 655 (18.6%), covers 99.0% of PF11879, 146.2 bits

KCND3_RABIT / Q9TTT5 Potassium voltage-gated channel subfamily D member 3; Voltage-gated potassium channel subunit Kv4.3 from Oryctolagus cuniculus (Rabbit) (see paper)
Aligns to 442:563 / 655 (18.6%), covers 99.0% of PF11879, 145.7 bits

KCND2_HUMAN / Q9NZV8 Potassium voltage-gated channel subfamily D member 2; Voltage-gated potassium channel subunit Kv4.2 from Homo sapiens (Human) (see 21 papers)
KCND2 / RF|NP_036413.1 potassium voltage-gated channel subfamily D member 2 from Homo sapiens (see paper)
Aligns to 445:546 / 630 (16.2%), covers 100.0% of PF11879, 140.9 bits

KCND2_RABIT / P59995 Potassium voltage-gated channel subfamily D member 2; Voltage-gated potassium channel subunit Kv4.2 from Oryctolagus cuniculus (Rabbit) (see paper)
Aligns to 445:546 / 630 (16.2%), covers 100.0% of PF11879, 139.9 bits

KCND2_MOUSE / Q9Z0V2 Potassium voltage-gated channel subfamily D member 2; Voltage-gated potassium channel subunit Kv4.2 from Mus musculus (Mouse) (see 21 papers)
Aligns to 445:546 / 630 (16.2%), covers 100.0% of PF11879, 139.9 bits

KCND2_RAT / Q63881 Potassium voltage-gated channel subfamily D member 2; RK5; Shal1; Voltage-gated potassium channel subunit Kv4.2 from Rattus norvegicus (Rat) (see 45 papers)
Aligns to 445:546 / 630 (16.2%), covers 100.0% of PF11879, 139.7 bits

KCND1_RABIT / P59994 Potassium voltage-gated channel subfamily D member 1; Voltage-gated potassium channel subunit Kv4.1 from Oryctolagus cuniculus (Rabbit) (see paper)
Aligns to 10:113 / 178 (58.4%), covers 100.0% of PF11879, 137.6 bits

KCND1_HUMAN / Q9NSA2 Potassium voltage-gated channel subfamily D member 1; Voltage-gated potassium channel subunit Kv4.1 from Homo sapiens (Human) (see paper)
Aligns to 447:550 / 647 (16.1%), covers 100.0% of PF11879, 132.3 bits

KCND1_MOUSE / Q03719 Potassium voltage-gated channel subfamily D member 1; Voltage-gated potassium channel subunit Kv4.1; mShal from Mus musculus (Mouse) (see paper)
Aligns to 447:550 / 651 (16.0%), covers 100.0% of PF11879, 127.5 bits

KCNAL_DROME / P17971 Potassium voltage-gated channel protein Shal; Shaker cognate l; Shal2 from Drosophila melanogaster (Fruit fly) (see paper)
Aligns to 445:552 / 571 (18.9%), covers 76.9% of PF11879, 64.1 bits

Shal / GB|ABC86265.1 potassium voltage-gated channel protein Shal from Drosophila melanogaster (see paper)
Aligns to 445:490 / 490 (9.4%), covers 33.7% of PF11879, 35.3 bits

Or search for genetic data about PF11879 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory