Align putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) (characterized)
to candidate 350905 BT1377 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file)
Query= ecocyc::HISTCYCLOPRATPPHOS (203 letters) >FitnessBrowser__Btheta:350905 Length = 203 Score = 207 bits (528), Expect = 8e-59 Identities = 103/195 (52%), Positives = 137/195 (70%), Gaps = 1/195 (0%) Query: 9 ELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTKQRLWTKGETS 68 ELD++K +GL+P I+Q + +VLMLG+MN EA DKT+E+GKVTFFSRTK RLWTKGE S Sbjct: 2 ELDFDKMNGLVPAIIQDNETRKVLMLGFMNKEAYDKTVETGKVTFFSRTKNRLWTKGEES 61 Query: 69 GNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQ-WLFLYQLEQLLAERKS 127 GNFL+VVSI DCDNDTLL+ A+P GP CH GT +C+G+ + +FL L+ + +R Sbjct: 62 GNFLHVVSIKADCDNDTLLIQADPAGPVCHTGTDTCWGEKNEEPVMFLKALQDFIDKRHE 121 Query: 128 ADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHLLVLLQDQ 187 P+ SYT L+ SG +IAQKVGEE VET + AT L E +DL+YH++VLL + Sbjct: 122 EMPQGSYTTSLFESGINKIAQKVGEEAVETVIEATNGTNERLIYEGADLIYHMIVLLTSK 181 Query: 188 GLDLTTVIENLRKRH 202 G + + L++RH Sbjct: 182 GYRIEDLARELQERH 196 Lambda K H 0.317 0.132 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 130 Number of extensions: 4 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 203 Length of database: 203 Length adjustment: 21 Effective length of query: 182 Effective length of database: 182 Effective search space: 33124 Effective search space used: 33124 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 45 (21.9 bits)
Align candidate 350905 BT1377 (phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file))
to HMM TIGR03188 (hisE: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31))
../bin/blast/fastacmd -i /tmp/list.7094.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.7094.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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