Align Histidinol-phosphate aminotransferase 1; EC 2.6.1.9; Imidazole acetol-phosphate transaminase 1 (uncharacterized)
to candidate H281DRAFT_03924 H281DRAFT_03924 histidinol-phosphate aminotransferase
Query= curated2:Q46Y48 (376 letters) >FitnessBrowser__Burk376:H281DRAFT_03924 Length = 370 Score = 563 bits (1452), Expect = e-165 Identities = 278/363 (76%), Positives = 317/363 (87%) Query: 13 FGPDYVRAISPYIAGKPISEVAREFGLDEAGIVKLASNENPLGMPESAKHAAAAAIAELG 72 FGP YVRAI+PYIAGKPISEVAREFGLDEA IVKLASNENPLGMPESAK A A A +ELG Sbjct: 5 FGPSYVRAIAPYIAGKPISEVAREFGLDEANIVKLASNENPLGMPESAKRAMAQAASELG 64 Query: 73 RYPDSNGFELKAALSTKLGVPQDWLTLGNGSNDILELAAHALVTPGQSIVYAEYSFAVYA 132 RYPD+N FELKAALS + GVP DW+TLGNGSNDILE+AAHA V GQSI+YA+YSFAVYA Sbjct: 65 RYPDANAFELKAALSERYGVPSDWITLGNGSNDILEIAAHAFVEKGQSIIYAQYSFAVYA 124 Query: 133 LATQEIGARAIVVKARDYGHDLDAMAAAITSDTRLVFIANPNNPTGTFVPAAALETFLAK 192 LATQ +GARAIVV A +YGHDLDAM AAIT DTRL+F+ANPNNPTGTF+ + LE FL K Sbjct: 125 LATQGLGARAIVVPAVEYGHDLDAMLAAITDDTRLIFVANPNNPTGTFIEGSKLEAFLDK 184 Query: 193 VPAEVVVVLDEAYNEYLDDDQQYDSVAWVRRYPNLLVSRTFSKAYGLAGLRIGYAVAQPE 252 VP V VVLDEAY EYL +++YDS+ WVRRYP+LLVSRTFSKA+GLAGLR+G+A+AQPE Sbjct: 185 VPRNVAVVLDEAYTEYLPAEKRYDSIEWVRRYPSLLVSRTFSKAFGLAGLRVGFAIAQPE 244 Query: 253 LTDLLNRIRQPFNVNSVAQAAAVAALGDTAFLQRSAELNRAGKAQLVEAFSRLGLEFVAS 312 LTDLLNR+RQPFNVN++AQAAA+AAL D AFL++SA LN G +L EAF +LGLE+V S Sbjct: 245 LTDLLNRLRQPFNVNTLAQAAAIAALNDKAFLEKSAALNAQGYRRLTEAFEKLGLEYVPS 304 Query: 313 SGNFVLVRVGDDDDAGARVNVALLRQGVIVRPVGNYGMPRWLRVTIGLPDENAAFIAALE 372 GNFVLVRVG+DD AG RVN+ LL+QGVIVRPVGNYG+P+WLRVTIGLP+EN AFIAALE Sbjct: 305 DGNFVLVRVGNDDAAGNRVNIELLKQGVIVRPVGNYGLPQWLRVTIGLPEENEAFIAALE 364 Query: 373 RAL 375 + L Sbjct: 365 KTL 367 Lambda K H 0.318 0.134 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 578 Number of extensions: 19 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 376 Length of database: 370 Length adjustment: 30 Effective length of query: 346 Effective length of database: 340 Effective search space: 117640 Effective search space used: 117640 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 50 (23.9 bits)
Align candidate H281DRAFT_03924 H281DRAFT_03924 (histidinol-phosphate aminotransferase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))
../bin/blast/fastacmd -i /tmp/list.20884.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.20884.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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