Align histidinol dehydrogenase (EC 1.1.1.23) (characterized)
to candidate H281DRAFT_05652 H281DRAFT_05652 histidinol dehydrogenase
Query= BRENDA::Q8G2R2 (430 letters) >FitnessBrowser__Burk376:H281DRAFT_05652 Length = 440 Score = 389 bits (1000), Expect = e-113 Identities = 206/432 (47%), Positives = 285/432 (65%), Gaps = 5/432 (1%) Query: 2 VTTLRQTDPDFEQKFAAFLSGKREVSEDVDRAVREIVDRVRREGDSALLDYSRRFDRIDL 61 + L T DF++ A L+ + E ++R+V +I+ V+ GD+A+L+Y+ RFDR+ Sbjct: 5 IRKLDSTARDFQKSLHAVLAFEASEDEAIERSVAQILSDVKARGDAAVLEYTNRFDRLSA 64 Query: 62 EKTG-IAVTEAEIDAAFDAAPASTVEALKLARDRIEKHHARQLPKDD----RYTDALGVE 116 + + +E++AA + AL+ A R+ +H +Q + +YT+A G Sbjct: 65 NSVAALELPMSELEAALEGLEPKRRAALEAAAARVRGYHEKQKIECGSHSWQYTEADGTV 124 Query: 117 LGSRWTAIEAVGLYVPGGTASYPSSVLMNAMPAKVAGVDRIVMVVPAPDGNLNPLVLVAA 176 LG + T ++ G+YVPGG A+YPSSVLMNA+PA+VAGV IVMVVP PDG NPLVL AA Sbjct: 125 LGQKVTPLDRAGIYVPGGKAAYPSSVLMNAIPARVAGVREIVMVVPTPDGVKNPLVLAAA 184 Query: 177 RLAGVSEIYRVGGAQAIAALAYGTETIRPVAKIVGPGNAYVAAAKRIVFGTVGIDMIAGP 236 L GV ++ +GGAQA+ ALAYGT+T+ V KI GPGNAYVA+AKR VFGTVGIDMIAGP Sbjct: 185 LLGGVDRVFTIGGAQAVGALAYGTQTVPAVDKICGPGNAYVASAKRRVFGTVGIDMIAGP 244 Query: 237 SEVLIVADKDNNPDWIAADLLAQAEHDTAAQSILMTNDEAFAHAVEEAVERQLHTLARTE 296 SE+L++ D +P W+A DL +QAEHD AQSIL+ D+AF V +A+ L T+ R + Sbjct: 245 SEILVLCDGTTDPRWVAMDLFSQAEHDELAQSILLCPDDAFIGRVNDAINELLPTMPRRD 304 Query: 297 TASASWRDFGAVILVKDFEDAIPLANRIAAEHLEIAVADAEAFVPRIRNAGSIFIGGYTP 356 AS GA+I V+D +A +AN IA EHLEI+ + + IR+AG+IF+G YT Sbjct: 305 VIQASLEGRGALIKVRDMAEACAIANDIAPEHLEISALEPHQWGQLIRHAGAIFLGRYTS 364 Query: 357 EVIGDYVGGCNHVLPTARSARFSSGLSVLDYMKRTSLLKLGSEQLRALGPAAIEIARAEG 416 E +GDY G NHVLPT+R+ARFSS L V D+ KR+S++++ +E + LG A E+A EG Sbjct: 365 ESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSSVIEVSAEGAQTLGEIAAELAYGEG 424 Query: 417 LDAHAQSVAIRL 428 L AHA+S R+ Sbjct: 425 LQAHARSAEYRM 436 Lambda K H 0.318 0.134 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 449 Number of extensions: 25 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 430 Length of database: 440 Length adjustment: 32 Effective length of query: 398 Effective length of database: 408 Effective search space: 162384 Effective search space used: 162384 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 51 (24.3 bits)
Align candidate H281DRAFT_05652 H281DRAFT_05652 (histidinol dehydrogenase)
to HMM TIGR00069 (hisD: histidinol dehydrogenase (EC 1.1.1.23))
../bin/blast/fastacmd -i /tmp/list.4246.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.4246.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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