Align histidinol-phosphate aminotransferase imidazole acetol phosphate transaminase His3; EC 2.6.1.9 (characterized)
to candidate CA265_RS03630 CA265_RS03630 histidinol-phosphate transaminase
Query= CharProtDB::CH_125255 (384 letters) >FitnessBrowser__Pedo557:CA265_RS03630 Length = 346 Score = 261 bits (668), Expect = 2e-74 Identities = 156/374 (41%), Positives = 228/374 (60%), Gaps = 33/374 (8%) Query: 3 DLNTCLRKNILELQPYRCARDDFS--EGVLLDANECAYGSVISVDGVEFNRYPDPRQIEV 60 D+N +R+NI L+PY ARD+F V LDANE +YGS + + +NRYPDP Q+++ Sbjct: 2 DINDLVRENIKNLRPYSTARDEFKGQASVFLDANENSYGSPLPAN---YNRYPDPLQLDL 58 Query: 61 KQRLCDLRNKELSITKPLTPDNICMGVGSDEIIDSLIRISCIPGKDKILMCPPSYGMYTV 120 K + ++ + +N +G GSDE ID L R C PGKD +++ PP+YGMY V Sbjct: 59 KDAISKIKGVPI--------ENTFLGNGSDEAIDLLFRAFCNPGKDNVIVLPPTYGMYEV 110 Query: 121 SAKINDVEVVKVLLEPDFNLNVDAICETLSKDSAIKVFFACSPGNPTAKALKLEDIKKIL 180 SA INDVE+ KV L P+F L+++ I ET+ K++ K+ F CSP NPT ++ EDI+ IL Sbjct: 111 SANINDVEIRKVSLLPNFQLDMEKIAETIDKNT--KLIFICSPNNPTGNSINREDIETIL 168 Query: 181 EHPTWNGIVVVDEAYIDFSAPDMSALTLVNEYPNLAVCQTLSKSFGLAGIRIGFCLTSKP 240 + +NGIVVVDEAYI++ A + + + EY NL V QT SK++GLA +R+G +S Sbjct: 169 AN--FNGIVVVDEAYINY-ARQKTFIQELTEYGNLVVLQTFSKAWGLAALRLGMAFSSTK 225 Query: 241 IATIMNSLKAPYNISEPTSRLALDALSPQSIDKMHTYRDAIIQQRVRLCKELTTIKGMGK 300 + ++N +K PYNI++ T LA +AL ++I +++ + + +R RL K LT + + K Sbjct: 226 VIDVLNKIKPPYNINQATQDLAFEAL--KNIAQVNDWIKESVAERDRLSKALTALNIVKK 283 Query: 301 IIGGYDANFILIQVLDRPEGGKPSNDAAKYLYLQMATMHKVVVRFRGTEPLCEGALRITV 360 + DANFIL +V D A +Y + ++VR R LCEG LRITV Sbjct: 284 VYPS-DANFILTEVTD-----------ALKIYDTLVD-QGIIVRDRSKVTLCEGCLRITV 330 Query: 361 GTEEENTILLKTIK 374 GT+EEN LL ++ Sbjct: 331 GTKEENDKLLTVLE 344 Lambda K H 0.320 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 363 Number of extensions: 20 Number of successful extensions: 8 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 384 Length of database: 346 Length adjustment: 29 Effective length of query: 355 Effective length of database: 317 Effective search space: 112535 Effective search space used: 112535 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 49 (23.5 bits)
Align candidate CA265_RS03630 CA265_RS03630 (histidinol-phosphate transaminase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))
../bin/blast/fastacmd -i /tmp/list.10935.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.10935.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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