Align N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; EC 1.2.1.38; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase (uncharacterized)
to candidate Ac3H11_2950 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Query= curated2:B1K264 (313 letters) >FitnessBrowser__acidovorax_3H11:Ac3H11_2950 Length = 312 Score = 448 bits (1152), Expect = e-131 Identities = 227/305 (74%), Positives = 251/305 (82%), Gaps = 1/305 (0%) Query: 4 PTVFIDGDQGTTGLQIHARLRDRTDVRLLTLPAAERKDAARRADALNACDIAILCLPDAA 63 P VFIDGDQGTTGLQIH RLR RTD+ LLTLP AERK+AARRA+A+N CDIAILCLPD A Sbjct: 5 PLVFIDGDQGTTGLQIHERLRGRTDLHLLTLPDAERKNAARRAEAINHCDIAILCLPDGA 64 Query: 64 AREAVGFIRNPAVRVIDASSAHRTQPDWVYGFPEMADGHAHDIAHAKRVTNPGCYPTGAI 123 AREAV I NPAV+VIDASSAHRT P WVYGFPE+ IA A+RV+NPGCYPTGA+ Sbjct: 65 AREAVTAITNPAVQVIDASSAHRTDPQWVYGFPELDAAQPARIASAQRVSNPGCYPTGAV 124 Query: 124 GLLRPLLQAGLLPRDYPVSIHAVSGYSGGGRAAVDAFESGDAAARALPLQVYGLALEHKH 183 LLRPL+QAGLL R++ V++HAVSGYSGGGRA V+ E G A+A Q+YGL LEHKH Sbjct: 125 ALLRPLVQAGLLGREHAVTVHAVSGYSGGGRARVEEHE-GPGGAQAPAFQLYGLKLEHKH 183 Query: 184 VPEIRQHAGLAHRPFFVPAYGAYRQGIVLTIPIELRLLPAGVTGERLHACLAHHYADARH 243 PEI QHAGLA RP FVPAYGA+RQGIVL+IP+ + LPAG +GERLHACL HYA A H Sbjct: 184 TPEIAQHAGLAQRPIFVPAYGAFRQGIVLSIPLFVHQLPAGASGERLHACLQQHYAGAAH 243 Query: 244 VDVMPLADAAAATHLDPQALNGTNDLRLGVLVNADGGQVLLSAVFDNLGKGASGAAVQNL 303 V+VMPLA A AA HLDPQALNGTN LRLGV NA GQVLL+AVFDNLGKGASGAAVQNL Sbjct: 244 VEVMPLAQAEAAEHLDPQALNGTNQLRLGVFSNARHGQVLLTAVFDNLGKGASGAAVQNL 303 Query: 304 DLMLG 308 DLMLG Sbjct: 304 DLMLG 308 Lambda K H 0.322 0.138 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 389 Number of extensions: 19 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 313 Length of database: 312 Length adjustment: 27 Effective length of query: 286 Effective length of database: 285 Effective search space: 81510 Effective search space used: 81510 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 48 (23.1 bits)
Align candidate Ac3H11_2950 (N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38))
to HMM TIGR01851 (argC: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38))
../bin/blast/fastacmd -i /tmp/list.422.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.422.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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