Align Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 (characterized)
to candidate AZOBR_RS07795 AZOBR_RS07795 N-acetyl-gamma-glutamyl-phosphate reductase
Query= SwissProt::Q93Z70 (401 letters) >FitnessBrowser__azobra:AZOBR_RS07795 Length = 350 Score = 415 bits (1066), Expect = e-120 Identities = 206/343 (60%), Positives = 252/343 (73%) Query: 59 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK 118 IR+G+LGASGYTGAE+VR+L HP ++ +TA+R+AG+ M VFPHL LP LV ++ Sbjct: 8 IRVGILGASGYTGAELVRMLLRHPGVEICALTAERQAGKPMAEVFPHLGQFNLPGLVKIE 67 Query: 119 DADFSTVDAVFCCLPHGTTQEIIKELPTALKIVDLSADFRLRNIAEYEEWYGQPHKAVEL 178 + + +DAVFC LPHGTTQE+I LP +K+VDLSADFRL + AEY WYG H+AVEL Sbjct: 68 EVAWDKLDAVFCALPHGTTQEVIAGLPRHIKVVDLSADFRLSDPAEYATWYGHEHRAVEL 127 Query: 179 QKEVVYGLTEILREDIKKARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSG 238 QKEV YGLTE R+ ++KAR+VANPGCYPT L L+PLL +I+ I+IDAKSGVSG Sbjct: 128 QKEVAYGLTEFNRQGVRKARVVANPGCYPTCSLLALLPLLMDEMIEPGGIVIDAKSGVSG 187 Query: 239 AGRGAKEANLYSEIAEGISSYGVTRHRHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQ 298 AGR AK+ NL++E++EG ++YGV HRH+PEIEQ L A VTVSFTPHL+PM RGM Sbjct: 188 AGRDAKQQNLFTEVSEGFNAYGVGHHRHMPEIEQELRLAAGRPVTVSFTPHLVPMNRGMM 247 Query: 299 STIYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRTHNVRGSNYCHMSVFPDRIP 358 +TIYV MA GV +DL L YE E FV V G+ P T +VR SN + VFPDR P Sbjct: 248 ATIYVRMADGVTADDLRATLTARYESEPFVNVTAAGIAPATRHVRASNQALIGVFPDRTP 307 Query: 359 GRAIIISVIDNLVKGASGQALQNLNIMLGYPETTGLLHQPLFP 401 AII+SVIDNLVKGASGQA+QN+N+M G ETTGL PLFP Sbjct: 308 RGAIIVSVIDNLVKGASGQAIQNMNVMFGLGETTGLEQAPLFP 350 Lambda K H 0.318 0.134 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 437 Number of extensions: 11 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 401 Length of database: 350 Length adjustment: 30 Effective length of query: 371 Effective length of database: 320 Effective search space: 118720 Effective search space used: 118720 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 50 (23.9 bits)
Align candidate AZOBR_RS07795 AZOBR_RS07795 (N-acetyl-gamma-glutamyl-phosphate reductase)
to HMM TIGR01850 (argC: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38))
../bin/blast/fastacmd -i /tmp/list.23188.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.23188.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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