Align amino-acid N-acetyltransferase (EC 2.3.1.1) (characterized)
to candidate PfGW456L13_913 N-acetylglutamate synthase (EC 2.3.1.1)
Query= BRENDA::P22567 (432 letters) >FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_913 Length = 432 Score = 750 bits (1936), Expect = 0.0 Identities = 373/432 (86%), Positives = 404/432 (93%) Query: 1 MPDYVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGS 60 MP+YVNWLRHASPYIN+HRD TFVVMLPG+GVEHPNFGNIVHDLVLLHSLG RLVLVHGS Sbjct: 1 MPEYVNWLRHASPYINAHRDCTFVVMLPGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGS 60 Query: 61 RPQIEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGAR 120 RPQIEARLAARGL P YH +R+TDA TLECVIDAVG LRIAIEARLSMDMA+SPMQG+R Sbjct: 61 RPQIEARLAARGLTPHYHHGMRITDAATLECVIDAVGQLRIAIEARLSMDMASSPMQGSR 120 Query: 121 LRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPLGYSPTGEIF 180 LRVA GNLVTARPIGV+EGVDYHHTGEVRR+DRKGI RLLDERSIVLLSPLGYSPTGEIF Sbjct: 121 LRVASGNLVTARPIGVLEGVDYHHTGEVRRVDRKGINRLLDERSIVLLSPLGYSPTGEIF 180 Query: 181 NLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHLQRLGNSYQAEL 240 NLACEDVA RAAIDL A+KL+L+GA+ GL+D G+LVRELRPQQVPAHLQRLG++YQAEL Sbjct: 181 NLACEDVATRAAIDLGADKLLLFGADLGLIDEHGRLVRELRPQQVPAHLQRLGSNYQAEL 240 Query: 241 LDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQLREAGIEDVGGLI 300 LDAAA+ACR GV RSHIVSY EDGALL+ELFTR G GTLVAQEQFE +REA IEDVGGL+ Sbjct: 241 LDAAAEACRGGVARSHIVSYAEDGALLTELFTRDGGGTLVAQEQFEVVREAAIEDVGGLL 300 Query: 301 ELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADSEAGELACLAVNP 360 +LI PLEEQGILVRRSREVLEREIEQFS+VEREG+IIACAALY IADS+AGELACLAVNP Sbjct: 301 DLISPLEEQGILVRRSREVLEREIEQFSVVEREGMIIACAALYQIADSDAGELACLAVNP 360 Query: 361 EYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARASLYN 420 EYRHGGRGDELLERIE RAR GLKTLFVLTTRTAHWFRERGF PSSV+RLP+ARASLYN Sbjct: 361 EYRHGGRGDELLERIETRARAQGLKTLFVLTTRTAHWFRERGFVPSSVDRLPSARASLYN 420 Query: 421 FQRNSQVFEKSL 432 +QRNS++FEK+L Sbjct: 421 YQRNSKIFEKAL 432 Lambda K H 0.321 0.138 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 736 Number of extensions: 14 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 432 Length of database: 432 Length adjustment: 32 Effective length of query: 400 Effective length of database: 400 Effective search space: 160000 Effective search space used: 160000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 51 (24.3 bits)
Align candidate PfGW456L13_913 (N-acetylglutamate synthase (EC 2.3.1.1))
to HMM TIGR01890 (argA: amino-acid N-acetyltransferase (EC 2.3.1.1))
../bin/blast/fastacmd -i /tmp/list.20273.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.20273.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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