Align 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14) (characterized)
to candidate AO356_17740 AO356_17740 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
Query= BRENDA::P25665 (753 letters) >FitnessBrowser__pseudo5_N2C3_1:AO356_17740 Length = 770 Score = 932 bits (2409), Expect = 0.0 Identities = 473/764 (61%), Positives = 563/764 (73%), Gaps = 16/764 (2%) Query: 4 LNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGD 63 L HTLGFPR+G RELKKA E+YW G+ L AVGRELRARHW QK AGIDLLPVGD Sbjct: 3 LAHTLGFPRIGADRELKKALEAYWKGDLAPAALQAVGRELRARHWQLQKDAGIDLLPVGD 62 Query: 64 FAWYDHVLTTSLLLGNVPARHQ---NKDGSVDIDTLFRIGRGR------APTGEPAAAAE 114 FAWYD VL+ +L LG VP R N G +DTLF + RG A G+ A E Sbjct: 63 FAWYDQVLSHTLTLGAVPQRFHGTLNAQGRPTLDTLFAMARGATASCCGAEHGQAQYAQE 122 Query: 115 MTKWFNTNYHYMVPEFVKGQQFKLTWTQLLDEVDEALALGHKVKPVLLGPVTWLWLGKVK 174 +TKWF+TNYHY+VPEF Q F L+W QL DEVDEA ALGH+VKPV++GP+T+LWLGK K Sbjct: 123 LTKWFDTNYHYLVPEFSADQTFALSWEQLFDEVDEAHALGHQVKPVIIGPLTYLWLGKAK 182 Query: 175 GEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQ- 233 GE FD+L LL +LPVY ++L L +G+EWVQIDEP L L+LP AW A++ AY LQ Sbjct: 183 GEAFDKLGLLERLLPVYGEILNRLKAQGVEWVQIDEPILTLDLPLAWRSAFERAYHILQY 242 Query: 234 GQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLING 293 +K L+ TYF G+ NL +LPV GLH+D V + + ++ RLP+ +LS GL+NG Sbjct: 243 SPLKKLVATYFSGLQDNLGLAVSLPVDGLHIDAVRDPEQLGQVLDRLPTYKILSVGLVNG 302 Query: 294 RNVWRADLTEKYAQIKDIVGK--RDLWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQ 351 RNVWR +L + AQ++ + +LWV++SCSLLHSP+DL E RLD E+KSW AFA+Q Sbjct: 303 RNVWRCELEQALAQLQAAQERFGDNLWVSTSCSLLHSPVDLEREDRLDPELKSWLAFAVQ 362 Query: 352 KCHELALLRDALNSGDTAALAEW---SAPIQARRH-STRVHNPAVEKRLAAITAQDSQRA 407 KC E+A+LRDALN A+ + S +QARR S R+H V+ RLAAI QDSQR Sbjct: 363 KCGEVAVLRDALNDPQAPAVLQALSDSREVQARRAGSARIHKAEVQARLAAIGPQDSQRH 422 Query: 408 NVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQ 467 + + R E QRAR LPA+PTTTIGSFPQT IR R +K+G L AN+Y+ + I+ Sbjct: 423 SPFAQRIERQRARLALPAFPTTTIGSFPQTPAIRLARQAYKQGKLSANDYQDAMHTEIRH 482 Query: 468 AIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDIS 527 A+ QERLGLDVLVHGEAERNDMVEYF E LDG+ FT+ GWVQSYGSRCVKP I+ GDIS Sbjct: 483 AVQIQERLGLDVLVHGEAERNDMVEYFAEQLDGYAFTRFGWVQSYGSRCVKPAIIYGDIS 542 Query: 528 RPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVAD 587 RP +TV+W +YAQSLTDK +KGMLTGPVT+L WSFPREDVSR+ A+Q+ALALRDEV D Sbjct: 543 RPKAMTVDWIRYAQSLTDKVMKGMLTGPVTMLMWSFPREDVSRQVQARQLALALRDEVLD 602 Query: 588 LEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEF 647 LE AGI I+QIDE A REGLPLRR W YL W VEAFR+ A+ DDTQIHTHMCY EF Sbjct: 603 LEKAGIRIVQIDEAAFREGLPLRRGQWQHYLDWAVEAFRLCASGVGDDTQIHTHMCYSEF 662 Query: 648 NDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEAL 707 ND++ +IA +DADVITIETSRSDMELLE+FE FDYPN+IGPGVYDIHSP VP + AL Sbjct: 663 NDVIKAIADMDADVITIETSRSDMELLEAFEAFDYPNDIGPGVYDIHSPRVPDTAEMVAL 722 Query: 708 LKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLR 751 + KA KRI AERLW+NPDCGLKTRGWPET AAL NMV AA+ LR Sbjct: 723 MSKAVKRIAAERLWINPDCGLKTRGWPETEAALVNMVAAARQLR 766 Lambda K H 0.319 0.135 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 1709 Number of extensions: 75 Number of successful extensions: 7 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 753 Length of database: 770 Length adjustment: 40 Effective length of query: 713 Effective length of database: 730 Effective search space: 520490 Effective search space used: 520490 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 55 (25.8 bits)
Align candidate AO356_17740 AO356_17740 (5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase)
to HMM TIGR01371 (metE: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC 2.1.1.14))
../bin/blast/fastacmd -i /tmp/list.11594.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.11594.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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