Family Search for PF13937 (DUF4212)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF13937 hits 11 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

Sama_1522 small component of lactate uptake system from Shewanella amazonensis SB2B
Aligns to 9:86 / 88 (88.6%), covers 98.7% of PF13937, 119.3 bits

• mutant phenotype: PFam PF13937.2 (DUF4212). conserved cofit with Sama_1523

Shew_2372 small component of L-lactate and L-malate uptake system from Shewanella loihica PV-4
Aligns to 9:86 / 88 (88.6%), covers 98.7% of PF13937, 119.1 bits

• mutant phenotype: PFam PF13937.2 (DUF4212). conserved cofit with Shew_2371

HP15_1252 small component of pyruvate transporter (TIGR03647) from Marinobacter adhaerens HP15
Aligns to 9:86 / 88 (88.6%), covers 98.7% of PF13937, 116.5 bits

• mutant phenotype: The data for HP15_1252 is noisy, but it is important for pyruvate utilization, and is 74% identical to Psest_0346, which is also important for pyruvate utilization. HP15_1252 belongs to TIGR03647, which was predicted to be the small subunit of a transporter.

Psest_0346 small component of pyruvate/D-alanine transporter (TIGR03647) from Pseudomonas stutzeri RCH2
Aligns to 9:86 / 87 (89.7%), covers 98.7% of PF13937, 107.0 bits

• mutant phenotype: Important for utilization of D-alanine and pyruvate, along with Psest_0347. Belongs to TIGR03647, which was predicted to be the small subunit of a transporter.

Or search for genetic data about PF13937 in the Fitness Browser